Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0291 ATGTCCAATAATACCATGATATATGAATGGAGAAAAGCATTTAAAATTATCAAGAATATTTTAGAGGAAAGGCGCAATTCGCCAGAAAAATATGGAGGAGATTTTCTTGACCAGGCAATTAATGACATGGAAAAGGACAAAATTATGAATGATGACCAAATTGTGTACCTCGTATTAGGGATATGGTTTGCTAATTCTGCATCAATTTCATCAATGGCACAATTAATCTTCAAGTTTTTATCAGAGTATCCTTCAGTCGTGGAAGAACTAAGAGTAGAACATGAGGAAATTCTAAGAAGCCGAGACAAATCAAGAACTTCATCATTGACATGGAATGAATACAAATCCATGAAATTTACACGACATGTAATGAATGAGACCCTTAGGTTCTCAATTTTGCTTCCTGGAATATTAAGAAAAACATTGAAAGATATTCACTTTAAAGAATATATAATTCCTGCTAATTGGATCATCCTGGCTTTTACACCAAATCTTCATATGAACTCAGAAATATATGAGGATCCACTTACTTTCAATCCATGGCGCTGGAAAGAGCTTGACTCCTTCACTGTGTCCAAAAATTTCAAGCCTTTTGGTGGAGGATTGACACAATGTCCAGGAGCTGAGTTAAGTAGAGCTTTCATAGCCACCTTTCTTCATGTTTTGGTCACAAAATATAGGTGGACAAAAATCAAAGGAGGAAAAGTTGTTCGGAATCCTATTTTGGAATTTAGTGATAGAATTCACATCAAGATTTGGGAGAACCGTGAGAAAACTTAA 780 0.35 MSNNTMIYEWRKAFKIIKNILEERRNSPEKYGGDFLDQAINDMEKDKIMNDDQIVYLVLGIWFANSASISSMAQLIFKFLSEYPSVVEELRVEHEEILRSRDKSRTSSLTWNEYKSMKFTRHVMNETLRFSILLPGILRKTLKDIHFKEYIIPANWIILAFTPNLHMNSEIYEDPLTFNPWRWKELDSFTVSKNFKPFGGGLTQCPGAELSRAFIATFLHVLVTKYRWTKIKGGKVVRNPILEFSDRIHIKIWENREKT* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0291 259 SUPERFAMILY Cytochrome P450 6 237 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0291 259 PANTHER CYTOCHROME P450 26 9 252 - -
Amo01g0291 259 Gene3D Cytochrome P450 2 258 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0291 259 Pfam Cytochrome P450 10 237 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0291 259 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 198 207 IPR017972 GO:0005506|GO:0016705
Amo01g0291 259 PRINTS E-class P450 group I signature 161 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0291 259 PRINTS E-class P450 group I signature 53 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0291 259 PRINTS E-class P450 group I signature 195 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0291 259 PRINTS E-class P450 group I signature 73 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0291 259 PRINTS E-class P450 group I signature 121 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0291 259 PRINTS E-class P450 group I signature 205 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0291 259 PANTHER CYTOCHROME P450 87A3-LIKE 9 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0291 Amo-Chr1 4757694 4759394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0291 12 257 Cytochrome P450 AT1G12740 42.688 1.79e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0291 - - aip:107619015 508.834