Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0278 ATGGAAAAGGACAAAATTATGAATGATGACCAAATTGTGTACCTCGTATTAGGGATATGGTTTGCTAATTCTGCATCAATTTCATCAATGGCACAATTAATCTTCAAGTTTTTATCAGAGTATCCTTCAGTCGTGGAAGAACTAAGAGTAGAACATGAGCAAATTCTAAGAAGCCGAGACAAATCAAGAACTTCATCATTGACATGGAATGAATACAAATCCATGAAATTTACACAACATGTAATGAATGAGACCCTTAGGTTCTCAATTTTGCTTCCTGGAATATTAAGAAAAACATTGAAAGATATTCACTTTAAAGAATATATAATTCCTGCTAATTGGATCATCCTGGCTTTTACACCAAATCTTCATATGAACTCAGAAATATATGAGGATCCACTTACTTTCAATCCATGGCGCTGGAAAGAGCTTGACTCCTTCACTGTGTCCAAAAATTTCAAGCCTTTTGGTGGAGGATTGACACAATGTCCAGGAGCTGAGTTAAGTAGAGCTTTCATAGCCACCTTTCTTCATGTTTTGGTCACAAAATATAGGTGGACAAAAATCAAAGGAGGAAAAGTTGTTCGGAATCCTATTTTGGAATTTAGTGATAGAATTCACATCAAGATTTGGGAGAACCGTGAGAAAACTTAA 654 0.3532 MEKDKIMNDDQIVYLVLGIWFANSASISSMAQLIFKFLSEYPSVVEELRVEHEQILRSRDKSRTSSLTWNEYKSMKFTQHVMNETLRFSILLPGILRKTLKDIHFKEYIIPANWIILAFTPNLHMNSEIYEDPLTFNPWRWKELDSFTVSKNFKPFGGGLTQCPGAELSRAFIATFLHVLVTKYRWTKIKGGKVVRNPILEFSDRIHIKIWENREKT* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0278 217 Gene3D Cytochrome P450 1 216 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0278 217 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 156 165 IPR017972 GO:0005506|GO:0016705
Amo01g0278 217 SUPERFAMILY Cytochrome P450 4 194 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0278 217 Pfam Cytochrome P450 3 196 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0278 217 PRINTS E-class P450 group I signature 79 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0278 217 PRINTS E-class P450 group I signature 163 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0278 217 PRINTS E-class P450 group I signature 31 57 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0278 217 PRINTS E-class P450 group I signature 153 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0278 217 PRINTS E-class P450 group I signature 11 28 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0278 217 PRINTS E-class P450 group I signature 119 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0278 217 PANTHER CYTOCHROME P450 26 1 210 - -
Amo01g0278 217 PANTHER CYTOCHROME P450 87A3-LIKE 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0278 Amo-Chr1 4643721 4645219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0278 6 215 Cytochrome P450 AT1G12740 43.056 1.91e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0278 - - aip:107619015 444.891