Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0259 ATGCCAATTATAAACAGTGGTCCCTCAGACAAAGAACCATTTGTTGAAGTTGATCCAACTGGAAGATATGGCAGATACAGTGAGACACTAGGAATAAATGGTGCTTCCAAGATTGTGTACAGAGCATTTGATAAAGAAGAGGGAACAGAAGTGGCTTGGAACCAAGTGAAGCTTGGGAACTTGAGTGATGATGATCCTTCCATGGTGGATAGGCTTTACTCTGAAGTCACATTGCTCAAAAGCATTTCCAATGAACACATCATTTCGCTTTTCGCCTTCTGGGAGGATGACATGAACAACACACTCAATTTCATCACTGAGGTATGTAGCAGTGGAAATCTGAGGGAATACAGGAGGAGGCACAAACATGTTTCCTTGAAGGCTCTCAAGAAATGGTCTAAGCAGATTCTTGAAGGTTTGAATTATTTGCATACTCATCATCCTTGCATCATCCATAGAGACCTCAACTGCAGTAATGTCTTTGTCAATGGAAATACTGGCCAGGTTAAGATTGGTGACTTGGGGTTGGCAACAATTGTGGGGAGGAGCCACTCGGCGCATTCGGTACTTGGGACGCCGGAATTCATGGCGCCGGAGTTATACGAGGAGAAGTACACGGAAATGGTGGACATATACTCATTTGGGATGTGTGTGTTAGAAATGGTGACAATAGAGATTCCATATAGTGAGTGTGACAATGTTGTGAAGGTGTACAAGAAAGTGTGTTCAGGTGTGAGGCCTCAGTCACTGAACAAGATTAAGGATGCACAAGTTAAGGCATTCATTGAGAGGTGCATTGCTAAGCCAAGGGCAAGACCTTCTGCTGCTCAGCTTCTCAAGGATCCTTTCTTTCATGAGCTTAATTGTGAAGACTCAGATTTCAAAGTTCTTGTTATGGTGTGA 903 0.433 MPIINSGPSDKEPFVEVDPTGRYGRYSETLGINGASKIVYRAFDKEEGTEVAWNQVKLGNLSDDDPSMVDRLYSEVTLLKSISNEHIISLFAFWEDDMNNTLNFITEVCSSGNLREYRRRHKHVSLKALKKWSKQILEGLNYLHTHHPCIIHRDLNCSNVFVNGNTGQVKIGDLGLATIVGRSHSAHSVLGTPEFMAPELYEEKYTEMVDIYSFGMCVLEMVTIEIPYSECDNVVKVYKKVCSGVRPQSLNKIKDAQVKAFIERCIAKPRARPSAAQLLKDPFFHELNCEDSDFKVLVMV* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0259 300 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0259 300 Gene3D Phosphorylase Kinase; domain 1 9 107 - -
Amo01g0259 300 ProSiteProfiles Protein kinase domain profile. 25 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0259 300 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 1 293 - -
Amo01g0259 300 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
Amo01g0259 300 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 293 - -
Amo01g0259 300 SUPERFAMILY Protein kinase-like (PK-like) 18 284 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0259 Amo-Chr1 4447243 4448534 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0259 10 284 MAP Kinase Kinase Kinase AT5G55560 74.182 8.11e-160 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Amo01g0259 Pkinase 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0259 K08867 - gmx:100818126 476.478