Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0255 ATGCCTGGCGTTAAAGTTCATCCATCGTACGCAGAGTCAGAGACATTCATCGAGGTGGATCCGTCGGGAAGATACGTGAGGTACCCGGAGCTTCTAGGATCAGGTTCAGTGAAGAGAGTGTACAGAGCATTTGACAAAGAAGAGGGAATAGAAGTGGCCTGGAACCAAGTGAGGCTCAAGAACTTCAAGGATGACCCTGTCATGGTCGATAGGCTTCACTCCGAAATCATGTTGCTAAGAGGCTTCTCGAACGACCACATCATTTCGCTATTCGCATCCTGGAAGGATGACGTCAGCGACACTTTGAATTTCATCACGGAAGTGTGCAGCAGCGGCAGTCTGAGGGAGTACAGGAAGAGGCACAAGAATGTCTCYATGAAGGCKGTGAAGAAATGGTCAAAGCAGATTCTAGAAGGTTTGAATTATTTGCACACACACRATCCCTGCATCATCCACAGAGACCTCAACTGCAGTAATGTGTTTGTCAATGGAAATACGGGCCAGGTTAAGATCGGTGACTTGGGCTTGGCGGCGGTTGTGGGGAGGAGTCACTCGGCGCATTCGGTTCTGGGGACGCCGGAGTTCATGGCGCCGGAGTTGTACTCGGAGAAGTACACGGAGAAGGTGGACATATACTCGTTTGGGATGTGTGTGTTGGAGATGGTGACGAGAGAGATTCCGTACAGCGAGTGTGAGAGTGTTGTGAAGATATACAAGAAGGTGACGTCAGGCGTGAGGCCGCAGTCGCTGAATAAGATTAACAATTCCGACCTCAAGTCCTTCATTCACAAGTGCATCGCTTACCAGCCCTCTGCTAGACCTTCTGCTGCCCAGCTTCTTCACGACCCTTTCTTTCATGACCTTCATGAGTCATGA 876 0.4989 MPGVKVHPSYAESETFIEVDPSGRYVRYPELLGSGSVKRVYRAFDKEEGIEVAWNQVRLKNFKDDPVMVDRLHSEIMLLRGFSNDHIISLFASWKDDVSDTLNFITEVCSSGSLREYRKRHKNVSMKAVKKWSKQILEGLNYLHTHXPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAVVGRSHSAHSVLGTPEFMAPELYSEKYTEKVDIYSFGMCVLEMVTREIPYSECESVVKIYKKVTSGVRPQSLNKINNSDLKSFIHKCIAYQPSARPSAAQLLHDPFFHDLHES* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0255 291 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0255 291 Gene3D Transferase(Phosphotransferase) domain 1 109 289 - -
Amo01g0255 291 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 289 - -
Amo01g0255 291 SUPERFAMILY Protein kinase-like (PK-like) 27 289 IPR011009 -
Amo01g0255 291 ProSiteProfiles Protein kinase domain profile. 26 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0255 291 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Amo01g0255 291 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0255 Amo-Chr1 4423504 4424379 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0255 12 285 MAP Kinase Kinase Kinase AT5G55560 71.168 1.55e-156 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Amo01g0255 Pkinase 2.6e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0255 K08867 - gmx:100782039 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0413 11 6604023 6604898 Amo01g0255 01 4423504 4424379 hybridization