Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0253 ATGCCTGGCGCTAAAGTTCATCCATCATACGCAGAGTCAGATACATTCATTGAGGTGGATCCGACAGGAAGATACGTGAGGTACCCTGAACTTCTAGGATCAGGTTCAGTGAAGAGAGTGTACAGAGCATTTGACAAAGAAGAGGGAATAGAAGTGGCCTGGAACCAAGTGAGGCTCAAGAACTTCAAGGATGACCCTGTCATGGTCGATAGGCTTCACTCCGAAATCATGTTGCTAAGAGGCTTCTCGAACGACCACATCATTTCGCTATTCGCATCCTGGAAGGATGACGTCAGCGACACTTTGAATTTCATCACGGAAGTGTGCAGCAGCGGCAGTCTGAGGGAGTACAGGAAGAGGCACAAGAATGTCTCYATGAAGGCKGTGAAGAAATGGTCAAAGCAGATTCTAGAAGGTTTGAATTATTTGCACACACACRATCCCTGCATCATCCACAGAGACCTCAACTGCAGTAATGTGTTTGTCAATGGAAATACGGGCCAGGTTAAGATCGGTGACTTGGGCTTGGCGGCGGTTGTGGGGAGGAGTCACTCGGCGCATTCGGTTCTGGGGACGCCGGAGTTCATGGCGCCGGAGTTGTACTCGGAGAAGTACACGGAGAAGGTGGACATATACTCGTTTGGGATGTGTGTGTTGGAGATGGTGACGAGAGAGATTCCGTACAGCGAGTGTGAGAGTGTTGTGAAGATATACAAGAAGGTGACGTCAGGCGTGAGGCCGCAGTCGCTGAATAAGATTAACAATTCCGACCTCAAGTCCTTCATTCACAAGTGCATCGCTCATCCGCCCTCTGCTAGACCTTCTGCTGCCCAGCTTCTTCACGACCCTTTCTTTCATGACCTTCATTCTTAG 873 0.4937 MPGAKVHPSYAESDTFIEVDPTGRYVRYPELLGSGSVKRVYRAFDKEEGIEVAWNQVRLKNFKDDPVMVDRLHSEIMLLRGFSNDHIISLFASWKDDVSDTLNFITEVCSSGSLREYRKRHKNVSMKAVKKWSKQILEGLNYLHTHXPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAVVGRSHSAHSVLGTPEFMAPELYSEKYTEKVDIYSFGMCVLEMVTREIPYSECESVVKIYKKVTSGVRPQSLNKINNSDLKSFIHKCIAHPPSARPSAAQLLHDPFFHDLHS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0253 290 ProSiteProfiles Protein kinase domain profile. 26 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0253 290 SUPERFAMILY Protein kinase-like (PK-like) 20 288 IPR011009 -
Amo01g0253 290 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 1 288 - -
Amo01g0253 290 Gene3D Transferase(Phosphotransferase) domain 1 109 289 - -
Amo01g0253 290 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Amo01g0253 290 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0253 290 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0253 Amo-Chr1 4398929 4399801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0253 12 285 MAP Kinase Kinase Kinase AT5G55560 70.803 9.26e-156 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Amo01g0253 Pkinase 1.6e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0253 K08867 - gmx:100782039 447.973