Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0232 ATGATTATCACTCTTCTTCCCTTGATCTTCCCCCAGAACTTCATCAGCGCGTTGTTCTCGGGATCCACGAAGGCGAGGCACCTCGTTTCAGCAATACTCGCAAGGTCCATTAGATCGGAGAGGGATTCGATGTCAAAGGTACTCAACTCCGCCTTCACATCCTCGCTGAGGCTGTTCAGGAAGACGAAAACTAAAACGACGTCGCTGAGCTTCTCGAAAAGCTCCCGGTATTCCTTGACGGAGGTATTGAATGAGACTCTTAGGTTCTCAACTTTGCTTCCTGGACTACTAAGAATAGCATTAAAAGATATTCACTTCAATGAATATGTAATTCCAGCTAATTGGATCATCCTGATTTTTACTCCCAGCCTTCATATGAACTCAGAAATATATAAAGACCCACTTACCTTCAATCCATGGCGCTGGAAAGAGCTTGACTCCCTCACCGTGTCAAAAAATTTCAAGCCTTTTGGTGGAGGATTGGCACAGTGTCCAGGAGCTGAGTTAAGTAGAGCTTTCATAGCCACCTTTCTTCATGTTTTGGTCACAAAATATAGGTGGACAAAAATCAAAGGAGGAAATGTTGTTCGGAATCCAATTCTGGGATTTAAGGATGAATTTCACATCAAGATTTGGGAACACCGTGAGTAA 651 0.4347 MIITLLPLIFPQNFISALFSGSTKARHLVSAILARSIRSERDSMSKVLNSAFTSSLRLFRKTKTKTTSLSFSKSSRYSLTEVLNETLRFSTLLPGLLRIALKDIHFNEYVIPANWIILIFTPSLHMNSEIYKDPLTFNPWRWKELDSLTVSKNFKPFGGGLAQCPGAELSRAFIATFLHVLVTKYRWTKIKGGNVVRNPILGFKDEFHIKIWEHRE* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0232 216 Pfam Cytochrome P450 79 196 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0232 216 Gene3D Cytochrome P450 64 214 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0232 216 PRINTS E-class P450 group IV signature 109 123 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0232 216 PRINTS E-class P450 group IV signature 125 143 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0232 216 PRINTS E-class P450 group IV signature 164 182 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0232 216 PRINTS E-class P450 group IV signature 148 164 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0232 216 PRINTS E-class P450 group IV signature 76 92 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0232 216 PANTHER CYTOCHROME P450 87A3-LIKE 61 211 - -
Amo01g0232 216 SUPERFAMILY Cytochrome P450 79 211 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0232 216 PANTHER CYTOCHROME P450 26 61 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0232 Amo-Chr1 4185139 4186774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0232 73 216 Cytochrome P450 AT1G12740 44.000 2.65e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0232 - - ahf:112790551 385.185