Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0202 ATGACAAATTTGCCCCCGTCATTATCAATGAACGCAGCCTTTGGCGGCAGCGGTGCTGCTCCTCCGCCTTCTCCCGGTGGCTCCTCCCAGAGCTCCCCCGGAGGCAKCAAGGATCGRAAGATGGCCTCCGCCGAGCAGCTRGTCCTCGAGCTCAGCAACCCCGACCTCCGTGAAAACGCTCTACTCGAACTCTCCAAGAAGAGAGAATTATTTCAAGATCTTGCTCCATTATTATGGAATTCATTTGGTACTATTGCTGCACTTTTGCAGGAAATAGTTTCAATATACCCTGTTCTTTCTCCACCAAATCTTACTCCAGCACAATCTAATCGTGTGTGCAATGCACTTGCTCTTCTTCAGTGRGTYGCKTCACACCCTGATACAAGGATGTTGTTCCTCAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACAAGCAAATCAAGACCATTTGAGTACTTGAGACTCACCAGTCTTGGCGTCATTGGTGCTTTGGTGAAGGTTGATGATACGGAAGTCATAAGTTTCCTTCTTTCAACTGAGATAATTCCATTGTGCCTGCGCACCATGGAAATGGGCAGTGAACTATCAAAAACAGTTGCAACTTTCATTGTTCAGAAAATCCTATTGGACGACGTGGGCTTGGATTATATTTGCACTACAGCAGAGCGTTTTTTTGCAGTAGGTCGAGTTTTGGGAAACATGGTGGCAGCTCTTGCTGAGCAGCCCTCATCTCGTTTGTTGAAGCATATCATCCGATGCTATCTTCGCCTATCAGATAATCCAAGGGCTTGTGATGCATTAAGAAGTTGTCTTCCAGACATGTTAAGAGATGCTACTTTCAGCAACTGCCTTCGTGAGGACCTTACAACCAGGAGGTGGCTGCAACAATTGCTTCAGAATGTTGGTGTGAGTCGGGTGCCCACTCTGCAAGCCGGAGGCGGCTTCGACCATATGATGTTATATGTTATGGAAAATGAAACATCAAGAAATGTGATGGGAATGGTATGA 1020 0.4588 MTNLPPSLSMNAAFGGSGAAPPPSPGGSSQSSPGGXKDRKMASAEQLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQXVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSNCLREDLTTRRWLQQLLQNVGVSRVPTLQAGGGFDHMMLYVMENETSRNVMGMV* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0202 339 SUPERFAMILY ARM repeat 49 278 IPR016024 -
Amo01g0202 339 Gene3D - 36 306 IPR011989 -
Amo01g0202 339 PANTHER BNAA05G20110D PROTEIN 1 323 - -
Amo01g0202 339 MobiDBLite consensus disorder prediction 1 44 - -
Amo01g0202 339 PANTHER UNCHARACTERIZED 1 323 - -
Amo01g0202 339 Pfam Cell differentiation family, Rcd1-like 47 305 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Amo01g0202 Rcd1 3.7e-128 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0202 K12606 - gmx:100784529 557.37