Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0192 ATGGGGAAAAGTGTTATTATGCTTTGGAGCTTTTCCCTCCTCCCCTCTTTCTTCATCTTCATGAACTTGTTGGGATTCTTAGAGGCTCAAAATAAGACTCCAATTGTTTATGTGTTTGGTGACTCTCTTGTTGATGTTGGTAACAACAATTACTTGGCTCTTTCTATTGAAAGAGCTGCTCTTCCTCACTATGGTATTGATTATCCTACAAAGAAACCAAATGGGAGGTTTAGTAATGGCAAGAATGCTGCAGATTTTATTGCTGAGAAATTGGGGATCCCAACTTCACCACCTTACCTCTCCCTAGTGTCCAAGTCCCGCAACAACAAGAATGTGTCATTTTTGGGTGGTGTTAGCTTTGCCTCTGGAGGTGCTGGAATATTCAGTGATAAAATAGATGAAATTTCTAGGCAAAACATACCTTTGCCAAATCAAGTGGACTACTACATCAAAGTGCAAGGGCAATTGACCGAACAAATAGGAGGACCTGCACTTCAGTGTCATCTCTCGAAATCCATCTTTGTTGTTGTGATTGGAAGCAACGATCTCTTTGGTTACTTCAACTCAAAGGATCTTCAAAATAAAAGCACCCCTCAACAATACGTTGATTCCATGACTTCCTCCCTAAAACTTCAACTACAGAGACTATACGAGCAAGGTGCAAGGAAATTTGAAATTGCGGGAATTGGTGCAATTGGATGCTGTCCTTCAAACAGGCTTAAGAACAAAACAGAGTGCTTCTCGGAAGCCAATTATTGGGCACTTAAATATAATGAAGATCTTAAAACCTTGTTGAAGAATTGGCAATTGGAGAAAAAGGACATAAGATACTCCTACTTCGATACTTATGCCGCTATCGAAGATCTCATTCAGAGCCCAATTTCTTATGGTATTGTTATCACATGCATATATACTTATAAATCATAA 927 0.3927 MGKSVIMLWSFSLLPSFFIFMNLLGFLEAQNKTPIVYVFGDSLVDVGNNNYLALSIERAALPHYGIDYPTKKPNGRFSNGKNAADFIAEKLGIPTSPPYLSLVSKSRNNKNVSFLGGVSFASGGAGIFSDKIDEISRQNIPLPNQVDYYIKVQGQLTEQIGGPALQCHLSKSIFVVVIGSNDLFGYFNSKDLQNKSTPQQYVDSMTSSLKLQLQRLYEQGARKFEIAGIGAIGCCPSNRLKNKTECFSEANYWALKYNEDLKTLLKNWQLEKKDIRYSYFDTYAAIEDLIQSPISYGIVITCIYTYKS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0192 308 CDD SGNH_plant_lipase_like 34 297 IPR035669 -
Amo01g0192 308 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 13 299 - -
Amo01g0192 308 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 13 299 - -
Amo01g0192 308 Pfam GDSL-like Lipase/Acylhydrolase 36 283 IPR001087 GO:0016788
Amo01g0192 308 Gene3D SGNH hydrolase 25 308 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0192 Amo-Chr1 3288328 3293060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0192 33 297 Acyl Lipid Metabolism Gene Families AT4G10950 30.370 6.11e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0192 - - gmx:100790145 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0527 11 9191093 9195545 Amo01g0192 01 3288328 3293060 hybridization
Amo01g0192 01 3288328 3293060 Amo07g0380 07 3566949 3570021 PCT
Amo07g0380 07 3566949 3570021 Amo01g0192 01 3288328 3293060 PCT