Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0176 ATGGCAAAGAAGAAGAAAACGTTGCTGGATATGTCGTCGGAGCTCTCTTCTAACAGCCACATCAAGATTTTCCGTTTACTGTCATGTCATCTTTTTATGATAGCTGATTTGAACATGCTGAGTGAAGAATCTCTTAAATTTGAATCCCATTACAATGATAACCTTGTTGGAACAAAAAAGGAGTGCTTTGAGAGATCTCCAATCAATCATGTTGACAAATTTTCTTGTCCCATAATTTTATTCCAAGGATTGGAGGACAAGATTGTGCAGCCTAAGCAAGCACGAAAAATTTACCAAGCACTGAAAGAGAAAGGTCTCCCAGTGGCTCTTGTTGAGTATGAAGGAGAACAACATGGTTTTCGAAAGGCTGAGAGCATTAAGTTTACACTTGAACAACAAATGGTCTTCTTTGCGCGATTGATTGGGAAATATAACGTTGCCGACGAGATTACTCCCATCAAAATTGACAACTTTGACACTTAA 483 0.3851 MAKKKKTLLDMSSELSSNSHIKIFRLLSCHLFMIADLNMLSEESLKFESHYNDNLVGTKKECFERSPINHVDKFSCPIILFQGLEDKIVQPKQARKIYQALKEKGLPVALVEYEGEQHGFRKAESIKFTLEQQMVFFARLIGKYNVADEITPIKIDNFDT* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0176 160 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 29 159 - -
Amo01g0176 160 Gene3D alpha/beta hydrolase 26 150 IPR029058 -
Amo01g0176 160 SUPERFAMILY alpha/beta-Hydrolases 45 158 IPR029058 -
Amo01g0176 160 Pfam Prolyl oligopeptidase family 18 142 IPR001375 GO:0006508|GO:0008236
Amo01g0176 160 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 29 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0176 Amo-Chr1 3110709 3112934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0176 31 160 Carbohydrate Esterase AT5G36210 76.923 4.51e-69 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0176 - - twl:120009167 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0542 11 9514536 9528060 Amo01g0176 01 3110709 3112934 hybridization