Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0140 ATGGATTCTGAAAACTATGATTTGGATGAGTTTTTGACATCCATTTCCTTTGATTTTTTATATGATTCGAACCCCAACAACCCTTCAGTTTCCATATATGAATTGGATTCTCTGCATGAACCTCAATTGTCACCATCAGATATGGATCATAATAATGGTTTGGTTTCGAAGTGTAACGGTTCTACGAAATGCTTCACTGACCAAGACCCATTTTTTGATCCATTGGAGGAACAAGTGTTATATGAATCAGCATTGACCTCATCGTGCATAACGAACAATTCAATGGAAAATCAACATTCTAATCAAGTGATTATGGCAGAAGAGTTCTTGGACTTCAATTCAGTGGACGATATTTGCCAATGGTTTGATCCGTCACAAGAGGATAATAACTCAAACACCTTTGTAGAACCAATGCAATGTGATGCTACTTCTTTTTCTTGGAAATCAGTTATGGATAGCTATGAGAATTGTCTATTAGGAAGCAAGGAACCCGAGTCGAATTTGATCGAACCGGCGGCGAGTTCTGCTGATGATACTGCCAGCTTTGAATGCCTATCAGAGTTTGATTTTGATGTGTTGAGAGTCTTATTCTCAGATTCATCAATTGAGGAGATTTTGAATTGTGAAGAAGCAATTTGCAACCCTTTGAATAATGGTTCTAGTTCTGTTTTGGAGTTATCATCAGAAAACAATAAAATGGAGATGATGGAGAACATTTCAATTCCAATGAACTTCACAAAAAATCTTGCTTGGTTTGAGGCTAGAAACAACTTGACCCAGCCGAAAGAGGAGCGGAAAAAACTTAGCAAGAAGAAGGACAAGGCAGGGGAGGGTAGTCGGCCGCGGCCGAAAGATCGCCAGAGGATTCAAGACTGCATTCAACAATTGAGAACAATCATCCCTGGCAAGGATGCAAATGGAGTGGTTCTACAAGAGAGTAGTGTGGAAGGTAGCAAACATTGTGGAACATGGTCATTTGAAGAGCCACATCAAACATTGTTATGCCCAATTATAGTTGAGGACATGTCTCATCCTGGCCAAATGCTTATAGAGGCCAATAGACATGTTACAAAAATAGATGTGTTTTGGTCCCTTCTCCATCTTGTAGAGCAGAAAAACTCCTCAGGAACTGGAATGGATTCATCAACTAATAATAACAAGTATTGCAATGTAATGAATGATAGCAGTGTTTCAAGATTGGACAAACAACAACAAGAGAAAGAGAGTTGCAACTTTTTTATGTCCATGACAGAGGCACTAAGCTTCAGTGGTTGA 1275 0.3914 MDSENYDLDEFLTSISFDFLYDSNPNNPSVSIYELDSLHEPQLSPSDMDHNNGLVSKCNGSTKCFTDQDPFFDPLEEQVLYESALTSSCITNNSMENQHSNQVIMAEEFLDFNSVDDICQWFDPSQEDNNSNTFVEPMQCDATSFSWKSVMDSYENCLLGSKEPESNLIEPAASSADDTASFECLSEFDFDVLRVLFSDSSIEEILNCEEAICNPLNNGSSSVLELSSENNKMEMMENISIPMNFTKNLAWFEARNNLTQPKEERKKLSKKKDKAGEGSRPRPKDRQRIQDCIQQLRTIIPGKDANGVVLQESSVEGSKHCGTWSFEEPHQTLLCPIIVEDMSHPGQMLIEANRHVTKIDVFWSLLHLVEQKNSSGTGMDSSTNNNKYCNVMNDSSVSRLDKQQQEKESCNFFMSMTEALSFSG* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0140 424 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 258 301 IPR043561 GO:0003700|GO:0006355
Amo01g0140 424 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 349 406 - -
Amo01g0140 424 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 305 351 - -
Amo01g0140 424 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 258 301 - -
Amo01g0140 424 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 349 406 IPR043561 GO:0003700|GO:0006355
Amo01g0140 424 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 305 351 IPR043561 GO:0003700|GO:0006355
Amo01g0140 424 MobiDBLite consensus disorder prediction 261 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0140 Amo-Chr1 2653518 2656043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0140 255 376 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 26.842 2.59e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0140 - - adu:110281254 783.867