Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0136 ATGGAAATCAACGGTGAATTTTTGGAAGAAACCGTGAGAGAGTTGAGGCAATATTTCAGAAGTGGAAGCACAAGAAGTGTTACATGGAGGAAGAACCAGCTCACAGCTCTTCTTGATCTTGTTCACAAGAATGAAGATGCCATATCTGAATCTCTTTACCAAGATCTTGGGAAGCATCCTGTTGAAGCTTTCCGCGATGAGATTGGTGCGATTGGGAAATCAGCCACCTATTCCTTGAGCTGCGTTGAGAAATGGATGGCCCCTAAAAAGAGTGATATACCTTTGCTTTTCTTCCCAGCAAAAGGAGAAGTATTGGCAGAACCACTAGGTGTGGTTCTCATATTTTCTTCTTGGAACTTCCCAATCATGCTGGCATTGGATCCATTAATCGGTGCCATAGCTGCTGGAAACGTTGTTGTAATAAAACCTTCAGAGCAAGCTCCAGCATGCTCTTCATTTCTTGCAAACACGATTCCTCGCTACTTGGACTCTAATGCTATCAGGGTCATTGAGGGAGGTGCAGCCGTTTCTCAACAACTTCTGCTACAWAAATGGGACAAAATATTCTTCACTGGAAGTCCACGGGTAGCAAGGTTTGTGATGTCGGCCGCAGCAAAGAACTTGACTCCGGTTACTTTAGAGCTGGGTGGAAAATGCCCAGCTATTCTTGATTCCCTGCCTAATCCTTCAGATTTTAAGTTGGCGGTGAAAAGAATCGTAGGAGGGAAATGGGGACCTTGCAGCGGACAGGCATGCATTGGAATAGACTATGTGCTTGTTGAGGAGAAAGTCTCTTCTCATTTGGTAGAACTGTTAAAGAAGATAATTAGAAGATTTTATGGGGACAACCCAATAGAGTCAAAGGTGATTTCCAGAATAGTAAACAAGCAGAACTTCACGAGACTCTGCAATCTTCTTAAAGATCCTCTTGTTGCAGCTTCCATTGTTCATGGTGGCTCGGTAGAAGAAAAACACCTGTTCATTGAGCCCACAATCTTACTTGATCCTCCGTTAGATGCTGACGTAATGACTGAAGAAATTTTTGGTCCATTGCTTCCCATAATCACGGTGAATAAAATTGGGGAAAGTATCGAGTTTATCAATTCGAGGCCAAAACCGCTTGCCATTTATGCCTTCACCAAAGATGAGACTTTAAAGAGAAGGATTCTTACAGAAACTTCCTCAGGGAGTGTCACATTTAATGACACAATGGTTCAATTTTTATGTGATACACTACCATTTGGAGGTGTTGGGCAAAGTGGTTTTGGAAGGTACCATGGGAAGTATTCTTTTGACACATTCAGCCATGAAAAAGCAGTAATGCATAGAAGCCTATGCCTTGAAATTGAGCCAAGATACCCTCCTTGGAGCAAATTCAAGCTAGAATTTCTCAGATTGGCATACAAACTTAACTATTTTGGACTATTACTCCACATCCTGGGTTTGAAAAGATACAAGTAG 1461 0.4216 MEINGEFLEETVRELRQYFRSGSTRSVTWRKNQLTALLDLVHKNEDAISESLYQDLGKHPVEAFRDEIGAIGKSATYSLSCVEKWMAPKKSDIPLLFFPAKGEVLAEPLGVVLIFSSWNFPIMLALDPLIGAIAAGNVVVIKPSEQAPACSSFLANTIPRYLDSNAIRVIEGGAAVSQQLLLXKWDKIFFTGSPRVARFVMSAAAKNLTPVTLELGGKCPAILDSLPNPSDFKLAVKRIVGGKWGPCSGQACIGIDYVLVEEKVSSHLVELLKKIIRRFYGDNPIESKVISRIVNKQNFTRLCNLLKDPLVAASIVHGGSVEEKHLFIEPTILLDPPLDADVMTEEIFGPLLPIITVNKIGESIEFINSRPKPLAIYAFTKDETLKRRILTETSSGSVTFNDTMVQFLCDTLPFGGVGQSGFGRYHGKYSFDTFSHEKAVMHRSLCLEIEPRYPPWSKFKLEFLRLAYKLNYFGLLLHILGLKRYK* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0136 486 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 9 484 - -
Amo01g0136 486 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
Amo01g0136 486 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Amo01g0136 486 SUPERFAMILY ALDH-like 9 455 IPR016161 GO:0016491
Amo01g0136 486 PANTHER ALDEHYDE DEHYDROGENASE 9 484 IPR012394 GO:0006081
Amo01g0136 486 PIRSF ALDH 1 480 IPR012394 GO:0006081
Amo01g0136 486 Pfam Aldehyde dehydrogenase family 9 440 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0136 Amo-Chr1 2582930 2595706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0136 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 61.777 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0136 K00128 - gmx:100808513 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0136 01 2582930 2595706 Amo11g0586 11 10590380 10614411 hybridization