Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0135 ATGAAGAACACTTTTGCTCTTTGTTCTTATTTACTCCTCCTTGTTACCCTTTTGGGTCTAGTATTCTCAAATTGCAAAGCCAACCAAGTTGACAACCTTGATGAGTTGATTAATTCAAGAAGCTCAGAGAATWCTCCTAAGACTCTTTCSTGGACAAAAGAAGATGCATACATACCAAAATATTATYATACTTCTTCTATTGRTCCATCTCCATCACAAGAGGAGCAAAAGTTGGCTGATAAAATAACTGCATTGCCAGGTCAACCATATTATGGGTCAAATTTTGACCAATATGCAGGGTATGTTACTGTTGATCCAAATGYTGGGAGAGATCTTTTCTATTATTTTGTGGAGTCTCCAGCTAATTYCTCTCAGTACAACCCTTTGGTTTTGTGGCTCAATGGAGTGGCTAATGTTCTGTTCTTGGAATCCCCTGCTGGAGTGGGATTCTCGTACACACAAAATGACTCACAAACATTTTTCCCTACTTCCGGTGACAAGGCTGCTGCAAAGGATGCCTACGTGTTCCTGGTTAACTGGCTAGACCGGTTTCCAGAGTACAAAGACCGTGAAATTTACATCACTGGCGAGAGCTATGCCGGTCACTATGTGCCTCAGCTTGCATATACTATTGTTGTCAACAATCTTTTCAGACAAATTGCCAACCAATCTGTTACAAACCTTCAAGGCATTGCTATTGGGAACCCATGGGTTGATGATTTTACTGGTGTAAAGGGGTTATTTGATTACCTCTGGACTCATGCTTTGAACTCAGACCAAACTCATGAGCTCATTGAGACAACTGTATACAATTTCGACCCATGCTCTGATGTGTACGTGCAAGCCTATCTAAATAGGCCAGAGGTCCAAGAAGCTCTTCATGCAAAACCCACACAATGGAGCCACTGCACCCAGTTACAGTCCTACCCCTCATCAAGAAGCTCATCGACCACAATATTAATTGGTGATGTAGATTCAAGAGTGTCAGTCACAGCTACCAGATATGCACTCAACGTCCTCAAGCTCCCTATTGTGACCCCTTGGTATCCATGGTATTCTGAAAACGAGATTGGAGGATATGCGGTGCAATACAAAGGATTGGTATTTGCGACAGTGAGAGGAGCAGGGCATATGGTTCCAAGCTGGCAGCCAGAACGGGCTTTCAACTTGATCTTAGCATTCCTCAGTGGATATCCCTCCCCTCCTGGTTCACCAAAATGA 1221 0.4283 MKNTFALCSYLLLLVTLLGLVFSNCKANQVDNLDELINSRSSENXPKTLSWTKEDAYIPKYYXTSSIXPSPSQEEQKLADKITALPGQPYYGSNFDQYAGYVTVDPNXGRDLFYYFVESPANXSQYNPLVLWLNGVANVLFLESPAGVGFSYTQNDSQTFFPTSGDKAAAKDAYVFLVNWLDRFPEYKDREIYITGESYAGHYVPQLAYTIVVNNLFRQIANQSVTNLQGIAIGNPWVDDFTGVKGLFDYLWTHALNSDQTHELIETTVYNFDPCSDVYVQAYLNRPEVQEALHAKPTQWSHCTQLQSYPSSRSSSTTILIGDVDSRVSVTATRYALNVLKLPIVTPWYPWYSENEIGGYAVQYKGLVFATVRGAGHMVPSWQPERAFNLILAFLSGYPSPPGSPK* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0135 406 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 269 400 IPR001563 GO:0004185|GO:0006508
Amo01g0135 406 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 135 IPR001563 GO:0004185|GO:0006508
Amo01g0135 406 PANTHER CARBOXYPEPTIDASE 134 267 - -
Amo01g0135 406 Gene3D - 275 306 - -
Amo01g0135 406 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Amo01g0135 406 PANTHER CARBOXYPEPTIDASE 269 400 - -
Amo01g0135 406 PANTHER CARBOXYPEPTIDASE 21 135 - -
Amo01g0135 406 Gene3D alpha/beta hydrolase 136 274 IPR029058 -
Amo01g0135 406 ProSitePatterns Serine carboxypeptidases, histidine active site. 367 384 IPR033124 GO:0004185
Amo01g0135 406 Pfam Serine carboxypeptidase 269 396 IPR001563 GO:0004185|GO:0006508
Amo01g0135 406 Pfam Serine carboxypeptidase 136 268 IPR001563 GO:0004185|GO:0006508
Amo01g0135 406 Pfam Serine carboxypeptidase 93 135 IPR001563 GO:0004185|GO:0006508
Amo01g0135 406 SUPERFAMILY alpha/beta-Hydrolases 85 399 IPR029058 -
Amo01g0135 406 Gene3D alpha/beta hydrolase 73 135 IPR029058 -
Amo01g0135 406 PRINTS Carboxypeptidase C serine protease (S10) family signature 367 380 IPR001563 GO:0004185|GO:0006508
Amo01g0135 406 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Amo01g0135 406 PRINTS Carboxypeptidase C serine protease (S10) family signature 142 152 IPR001563 GO:0004185|GO:0006508
Amo01g0135 406 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 134 267 IPR001563 GO:0004185|GO:0006508
Amo01g0135 406 Gene3D - 307 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0135 Amo-Chr1 2572351 2579313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0135 283 399 Calmodulin-binding Proteins AT2G22960 28.358 1.05e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0135 K16297 - gmx:100779407 451.825