Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0073 ATGCAATCCTTTACCATCATTATCCATGTCCTCACCTTGTCCTTATTGTATCATTTCTATGTGATTCTAGCTCAGCAACCTTACATTGGTGTGGCCACAACTGCATGTTCCCAAACTCTTAACTCAAATTCAATCCTCGGTTACACTTGCAATGGCTTGAAACCTAGTTGCCAATCTTACCTTACCTTCGAGTCTCAAATCAACTACAACTCTGTTCCTACAATTTCTTCTTTGTTGAACATTGATCCCACCCAGCTTTCCAAAGCGAATTCCGTTTCCCAGAACGCAACCTTTGAAATAAACAAGCTGGTGATTGTTCCTGTAAACTGTTCCTGTTTTGCTAATCAGTATTATCAGTATAACACTTCTTATAAGGTCCAAAGTGGCGACAACTATTTCATCATTGCTAACAACACTTTTGAAGGCCTTTCAACATGTCAAGCTATGAAGGATCAAAACAAAATCGATGAGTTAAAGCTTTCACCCGGTGATAAACTTAGAGTTCCTCTTAGATGTGCTTGTCCTACAAAGAATCAAACAGAGAAAGGTTTCAAGTACCTATTGAGTTACTTAGTTTCCTTTGGGGATGATGTTTCTCACATTAGTGAAAGATTTGGTGTTACCATTGAAACAATTCTTGAAGCTAATAGCCTTTCTTCCCAGAAACCAACCATCAATCCTTTTACCACACTTCTGGTTCCCCTTCAAGAAAAGCCATCAAGTTCACAAACGGTTATGACTCCACCGCCTCCGTCTCTGTCGCCATCGCAGCCGCCTCCGTCTTCTTCTGGTGGAAGTTCAAGCAAGACTTGGGTCTATGTGGTTGTCGGAGTTGTCGGAGGTGTAGTCTTAGTTTTAGTCCTCTTCTCCATCATTTTCAGGAAGCATTTTATCAGGAAGAAGAAGAAAGGCAATTCTGTGATTGTGTCTAAGAGCTTTGAAGCAATTGAGAAACAACAGGGGAAGAAGTTGGAGGAAGATTCAGAAACATTGTCAGAGATCATATCCGACATAGCACAATCATTCAAGGTTTACAAATTCAAGGAACTGCAGAGTGCAACAAATGATTTCAGTTCCGAATTATTGATCAAAGGGTCCGTTTATCGCGGCCTTATAAATGGAGATTTAGCTGCAATCAAGAAGATAAACAGAGATGTGTCCAAAGAGGTACAATTGCTGAACAAAGTGAATCATTCTAACGTGATTCGCCTCTCCGGCGTTAGCTTCAACGAGGGACATTGGTATCTTGTTTATGAGTATGCTGCTAATGGACCATTGAGTGATTGTATTTTTATGGAAAATGGCCAGTTCTTGAGTTGGAAACAGAGAATAAAAATTGCATTGGATGTGGCCACAGGACTTGACTATCTTCACAGTTTCACTTCTCCACCTTTTATCCACAAGGATTTAAAATGTGACAACATTCTTCTAGACGCTGATTTCAGGGCGAAGATTGCCAACTTTGGCCTCGCCCGGTCGATACAAGGCGAGGAAGACGAATTTTCGATGACAAGGCACATAGTGGGGACAAGAAATTACATGGCTCCTGAGTATTTGCAAAATGGTATAGTGTCTACAAAGCTTGATGTCTACGCATTTGGGGTTATGGTGGTGGAAATACTCACTGGAAGAGATGTTGCTGCTATCTACGCGGAATATGACAAGAAGAATTTAGAAGAAATTTTAAGCAGCATAGTTAAAGAGGAAGGAGATCATGAAAGACTAAAGGAATTTATGGATCCGTCATTGAAAGGAAATTATGCAACGGAGCATGCTGTGTTTATTATTGGAATGATTGAAAAATGTATAAAGAAAGATCCAGCTAGTCGACCTTCAATGCAAGACATTGTGTCATCTTTGTCCAAAGCCTTGGACTCATTGAACTGGGAATCCTTGGTTAATATCTCAGGATAG 1914 0.4033 MQSFTIIIHVLTLSLLYHFYVILAQQPYIGVATTACSQTLNSNSILGYTCNGLKPSCQSYLTFESQINYNSVPTISSLLNIDPTQLSKANSVSQNATFEINKLVIVPVNCSCFANQYYQYNTSYKVQSGDNYFIIANNTFEGLSTCQAMKDQNKIDELKLSPGDKLRVPLRCACPTKNQTEKGFKYLLSYLVSFGDDVSHISERFGVTIETILEANSLSSQKPTINPFTTLLVPLQEKPSSSQTVMTPPPPSLSPSQPPPSSSGGSSSKTWVYVVVGVVGGVVLVLVLFSIIFRKHFIRKKKKGNSVIVSKSFEAIEKQQGKKLEEDSETLSEIISDIAQSFKVYKFKELQSATNDFSSELLIKGSVYRGLINGDLAAIKKINRDVSKEVQLLNKVNHSNVIRLSGVSFNEGHWYLVYEYAANGPLSDCIFMENGQFLSWKQRIKIALDVATGLDYLHSFTSPPFIHKDLKCDNILLDADFRAKIANFGLARSIQGEEDEFSMTRHIVGTRNYMAPEYLQNGIVSTKLDVYAFGVMVVEILTGRDVAAIYAEYDKKNLEEILSSIVKEEGDHERLKEFMDPSLKGNYATEHAVFIIGMIEKCIKKDPASRPSMQDIVSSLSKALDSLNWESLVNISG* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0073 637 SUPERFAMILY Protein kinase-like (PK-like) 340 620 IPR011009 -
Amo01g0073 637 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 5 631 - -
Amo01g0073 637 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 5 631 - -
Amo01g0073 637 Gene3D LysM domain 179 246 IPR036779 -
Amo01g0073 637 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Amo01g0073 637 ProSiteProfiles LysM domain profile. 188 233 IPR018392 -
Amo01g0073 637 ProSiteProfiles LysM domain profile. 122 168 IPR018392 -
Amo01g0073 637 Gene3D Transferase(Phosphotransferase) domain 1 422 632 - -
Amo01g0073 637 SMART serkin_6 359 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0073 637 MobiDBLite consensus disorder prediction 244 258 - -
Amo01g0073 637 Gene3D LysM domain 119 178 IPR036779 -
Amo01g0073 637 Pfam LysM domain 124 169 IPR018392 -
Amo01g0073 637 Pfam LysM domain 190 234 IPR018392 -
Amo01g0073 637 CDD LysM 189 233 IPR018392 -
Amo01g0073 637 MobiDBLite consensus disorder prediction 239 265 - -
Amo01g0073 637 SMART LysM_2 189 234 IPR018392 -
Amo01g0073 637 SMART LysM_2 123 169 IPR018392 -
Amo01g0073 637 Pfam Protein kinase domain 366 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0073 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Amo01g0073 637 ProSiteProfiles Protein kinase domain profile. 295 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0073 Amo-Chr1 1717262 1719278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0073 1 630 Receptor kinase-like Gene Family AT2G23770 43.868 1.46e-165 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo01g0073 Pkinase 5.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0073 - - aip:107626052 1173.3