Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0037 ATGGGAGGAGCCACCGCGCAACAGCAGGAGTTAGAGAACATAATCGAAAAAGTCAAAACTGCCCAAAGATGCAAACAAACCAGGCGGATCCTAAAGTCAACCCTAAAGGGTTCAAAGTCTCTTGTGTACGAAATCAAGCAATATAACAACGACCTTGATCAACCAAGAGATGAAATTAAAGCTCTGATCAAAGAAAATGGTGCAGCTCAAGATTCAGAATCGCCATGCTGCAATTGCTTCTCGTCTTGTTCCCTTTGGTTTGGTAAGTGCTTCTTTCATATCCCTTTCTACAGGATAAGATCGGTGCGGAGCGAGAGGAACAGTTATTGTGATGCGAAGGAGATGCTTTCGAATGTTAGGGACGTTCTTGAACTTCTTAGTAGACAGAATATCGAGAAGAGGCTTAGCGGCGGTTCGATTAAGCGTCGTCCTTGTGGTTTTCCTGAGAAACCGGGTTTTACTGTTGGATTGGATGAGCCTTTGAGGAGGCTGAAGGTGGAGGTTCTGATGGAGGGCGTTTCGGTAATTGTATTGACTGGACTTGGTGGTTCTGGAAAGACTACTCTGGCTACAATGCTCTGTTTTGATGAACAAGTCAAAGATAAATTCGATGAAAATATATTGTTTGTCACCTTCTCCAAAAATCCCAAGTTGAAGACCATTGTAGAGAGACTATTTGAACAATGTGGATATCAAGTGCCTGAGTTTAAAAGCGACAATGATGCTGTTAACCAAATGGTAGTTTTATTGAGGCATATTGGGACAAGACCGACGTTGTTGGTCCTCGACGATGTTTGGCCTGGCTCAGAAGCCCTTGTTGAAAAATTTCAAATTCAAATGTCACAGTACAAGATTCTAGTGACTTCAAGGGTTGCATTTCCTAGATTCGCCTCTCACTTTATCCTAAAACCACTTAATCAAGAAGATGCATTGACGCTTTTCCGTCACTATGCTTTATTGGAAAGAAGCTGCTCAGATATACCAAATGAAGATATTGTCCAAAAGGTTGTAAGTGGTTGCAAGGGTTCACCTCTTGCTATTATGGTGATGGCTAGATCCCTCAGTCGTCAACCTTACGGGTTTTGGCTCAAGATAGTAGAGAAATTGTCACAAGGTCATTCTATACTTGATTCTAATGCTGAATTGGTAAACTGTCTACAAAAGATCTTAGAAGTATTGCAGAATAAGCCCTTCATAAAGGAGTGTTTCATGGACTTAGGGTTATTCCCCGAAGATCAAAGAATCCCTGTCACTGCTCTCATTGATATATGGAAAGAATTGTATGGACTGGACGATGATGGCCAAGAAGCAATGACCATCATCAATATATTGGACTCCATGAATTTGGTTAAGCTCTCAGTAGCAAGGAAAAGTGTTTGTGGTGTAGACAATTACTATTACAATAACCACTTCCTCGTCCTACATGATCTTGTAAGAGAACTTGCAATTTATCAAAGCAATCAAGAACCAATTGAACGTAGACAGAGACTGATGATTGATGTGAATGAAAATGCTAGCCAACGGTGGCTCGGTAAGAAGCAGAAAGGCATGATGATGGCCCGCATTTCAAGTTATCTGACACGATGTGTTAAACAAAAGGCAGTACAAGTCACCGTCCGCACATTGTCAATATCAACTGATGAAGCTTACCCTTCTCTCTTGTCCAATGTGAAAACAGATGAAACTGAGGTTTTGATTGTTGATCTCCGAACAAAACAGTACTCGTTCCCAGAATCGATTGAAAAAATGAACAAACTAAAAGTTATCATTGTTACAAATTATGGTTTCCATCCATCAGAACTGAACAATTTTGAGAAACTCAGTTCCTTATCAAACCTGAGAAGAATCAGATTAGAGAGAATTTCTGCTCCTCCGCTTGTCATATTGAAGAATCTAAGAAAAATATCCCTCTACATGTGTAATATGACTCGGGTTTTCCAAAATGGCAACATCCCAATTTCGGAAGCATTTCCAAATCTAGTCGAATTGAGCATTGACTACTGCAAAGATATGGTTAAATTGCCTAATGAGTTGTGTGATATTACCCCACTAAAGAATATCAGCATTACAAATTGTCACAAGTTTAATGCACTTCCCCAAGACATTGGAAAGTTATCAAAGCTGGAACTTCTAAGGCTTAGTTGTTGTACTGATTTGCAAGGGTTACCGAATTCAATTGGAAGGCTGTCGATTCTGCGTCTTCTTGACATCTCAAACTGCATGAACCTTCCAGATTTACCAGAAGACATTGGAAATCTGCGTAGTCTGAGAAACCTTTACATGACAGGTTGTTCAAATTGCGAATTGCCGTTCTCAGTCGCCAATCTTGAGAATTTAAAAGTCATATGTGATGAAGAAACTGCTGCTTCATGGGAAGCTTTCATACCAATTATTCCGAATCTAAAGGTAGAGGTGCCTCAAGTTGATGTCAACTTAAATTGGCTTCACCCACTTAGCTCCTAA 2463 0.4024 MGGATAQQQELENIIEKVKTAQRCKQTRRILKSTLKGSKSLVYEIKQYNNDLDQPRDEIKALIKENGAAQDSESPCCNCFSSCSLWFGKCFFHIPFYRIRSVRSERNSYCDAKEMLSNVRDVLELLSRQNIEKRLSGGSIKRRPCGFPEKPGFTVGLDEPLRRLKVEVLMEGVSVIVLTGLGGSGKTTLATMLCFDEQVKDKFDENILFVTFSKNPKLKTIVERLFEQCGYQVPEFKSDNDAVNQMVVLLRHIGTRPTLLVLDDVWPGSEALVEKFQIQMSQYKILVTSRVAFPRFASHFILKPLNQEDALTLFRHYALLERSCSDIPNEDIVQKVVSGCKGSPLAIMVMARSLSRQPYGFWLKIVEKLSQGHSILDSNAELVNCLQKILEVLQNKPFIKECFMDLGLFPEDQRIPVTALIDIWKELYGLDDDGQEAMTIINILDSMNLVKLSVARKSVCGVDNYYYNNHFLVLHDLVRELAIYQSNQEPIERRQRLMIDVNENASQRWLGKKQKGMMMARISSYLTRCVKQKAVQVTVRTLSISTDEAYPSLLSNVKTDETEVLIVDLRTKQYSFPESIEKMNKLKVIIVTNYGFHPSELNNFEKLSSLSNLRRIRLERISAPPLVILKNLRKISLYMCNMTRVFQNGNIPISEAFPNLVELSIDYCKDMVKLPNELCDITPLKNISITNCHKFNALPQDIGKLSKLELLRLSCCTDLQGLPNSIGRLSILRLLDISNCMNLPDLPEDIGNLRSLRNLYMTGCSNCELPFSVANLENLKVICDEETAASWEAFIPIIPNLKVEVPQVDVNLNWLHPLSS* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0037 820 PRINTS Disease resistance protein signature 175 190 - -
Amo01g0037 820 PRINTS Disease resistance protein signature 252 266 - -
Amo01g0037 820 PRINTS Disease resistance protein signature 340 354 - -
Amo01g0037 820 PRINTS Disease resistance protein signature 727 743 - -
Amo01g0037 820 Gene3D - 386 483 IPR036388 -
Amo01g0037 820 Gene3D Ribonuclease Inhibitor 505 791 IPR032675 -
Amo01g0037 820 Coils Coil 45 65 - -
Amo01g0037 820 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 406 IPR027417 -
Amo01g0037 820 Gene3D - 304 384 IPR042197 -
Amo01g0037 820 SUPERFAMILY L domain-like 573 782 - -
Amo01g0037 820 CDD ABC_ATPase 175 265 - -
Amo01g0037 820 Pfam NB-ARC domain 163 390 IPR002182 GO:0043531
Amo01g0037 820 Gene3D - 142 294 IPR027417 -
Amo01g0037 820 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 9 806 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0037 Amo-Chr1 968104 972814 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0037 173 773 WRKY Transcription Factor Family AT5G45050 23.339 1.12e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0037 - - gmx:100816134 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0037 01 968104 972814 Amo11g0701 11 14057323 14062035 hybridization
Amo05g1007 05 13150534 13156266 Amo01g0037 01 968104 972814 PCT
Amo01g0037 01 968104 972814 Amo05g1007 05 13150534 13156266 PCT