Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0033 ATGGTGGATGGAAGTCTGTTTAGTGGTGGCGCGGTTGGTGCTGGAATGCAGGAAGTGCTAAGACTGGCCATAGAAATGGTGGAGAAAGGTAAGAATTTCAAATCGGTGTTGAAGACGAAGAAGGAGACCTTAGATGCGTTGACTCCTCTGGTCGAAGAAATGAAACAATACGCGAGAGAGTTGGATCGCGGTACTGATACAGTAGCAAGTTTGGAGAAGGAGATAAACAAAGGGAAAGAGATAGTGGAGAAGTGCTCCAAGTTTCGTTGGTGGCGGTTTCCCTCTTTCCCTCTGTACCATGACAGGATTGAAGGAAGAAATAAGAAGCTCGGGAGGATTCTGTCTGTGAATGTGCAAACGCAGATCGGGAGGGATGTGATGGAGGTGCTGTATAACGTGAGGAATATTCTTGATATTATTCGTGATGATTATGGAGGGCGGTTAGGAGAAGAGAAAGTTTTGCGGGGTGTGAGTGGAGTTCCTGAGAAGCCTGAGTTCACAGTGGGGTTGGAGGAGCCTTTGAAGAAGTTGAAGGTTGAGGTTCTGAAGAAGCATGGTGACCGTGTTCTTTTGGTTACCGGGTTGGGAGGATCTGGAAAGAGCACACTGGCTAAGAAGCTCTGTTGGGATGAACAAGTCAAAGGCATGTTTGCAGACAATATCTTCTTCCAGACAGTGTCGAAATCACCCAACTTGAAGAGCATTGTACAGACACTATTTGAACACTGTGGACACCGGGCACCCGAGTTTCAAACCGATGAAGAGGCAATTAACCGGCTGGGGAACTTGCTGAGGCATGTTGGGGATAAAGGTAGACCAATATTATTGGTCCTGGATGATGTATGGTCTGGCACAGATTCAATTGTTGAAAAGTTCAAATTCTCCACCATTCCAGGTTACAAGATTGTAGTTACTTCAAGATTTGCATTTCGCAGATTCCATACTCAGTTCCACTTGAAACCACTTGGTGATGATGATGCCGTATCCCTCTTCCATCACTTTACACAAGCCAAAGACACTAACTCTTATAAGCCTGATGAAAATCTTGTCCATGAGATAGTGAGAGGTTGTAATGGTTCACCTCTGGCTCTAAAAGTTATTGGTGGATCCCTATGTCATCATCCTTATGAGTTCTGGCAAACAATGAAGGAACGGCTGAAGTCCAACAAAGACTTGGATTCTCACCTTCAAAATTGTCTAGACATAGTGGAAGACGACAAGGAGAAGGAGTGTTTCATGGACCTAGGTCTGTTCCCTGAAGATCAAAGGATCCGCGTTCCTTTGCTGAATGACATGTGGACAGAACTGCATGAACTTGATGAGGATGGAGTAAAAGCAATGAATATTATTCATAGTTTAGACTCCAAGAATTTGGCTAATGTCATTGTTACAAGGAAAGTTGCAACGGACGTGGAAATGTACTACAATAACCACTTCCTTATGCAGCATGATCTCCTTAGAGAGCTAGCAAACCATCAAAGCAACCAAGAACCGATCGAGCGAAGGAAAAGGCTGGCGATCGACTTGACTCAGAATGGGAAAAATTGTCCCAACTGGTTGGTAGGCCAGAATCAGCCGGGTATCGTTTCTCGCACGCTGTCATTCTTATCTGTAAGGGGGACACAACAACAACAGAAGCAGGAACAAGTCACTGCTCGCATAATGTTTGTTTCAACTGATGAAACATTCACTCCTGACTGGTACAACATGAACCTTGCTGAAACCGAAGTTCTGATTTTAAATATCCATTCAAACAAGTATACATTTCCGGATTTCATTCAGAAAATGAGAAAACTCAAAGTTCTCATAGTCACAAATCAGGGTTTCCATCCTTGTGAATTGAACAACTTTGAGGTACTTAGTTCATTACCATGCTTGAAAAGGATTAGCCTGGAAAAGGTTTCGGTTCCTAGCCTCTGCAAATTGAGGAAGCTGCGAAATCTGTCACTTTATATGTGTACTACAAAGCAGGCTTTTGGAAGTAGTGACATCAAAATTTCAGATGCACTGCCAAATTTAGTGGAGTTGAACATTGACTATTGCATGGATATGGTGGAATTGCCTTCTGATTTCTGTAACATTATGACCATGAAGAAGCTTAGTATCACTAACTGTCATAAGCTTTCTAAACTACCACCAGAAATCGTTATGCTGAAGAATCTGGAAGTTTTGAGACTTAGTTCCTGCTCTGATTTGAAAGAGATGCCAGAATCTGTTGAAAGGCTTCAACAGATTTGGTGTCTCGACATATCAGAGTGTATAAGCCTAACCCAGTTACCAGCAGACATCGGCGAGTTGCATAGTCTACGGAAGCTCTATATGTGGGGTTGCTCAGGATTGAACGAATTGCCGCACTCTGTCACATCCTTCGAAAATTTGAAGCATGTGATTCATGTGATCTGCGACGATGAGGCGGCTGCTTTATGGGAACATTTCAAAGAGTTCACCAGCCTTCCCAATCTGATGATAGTGAAGGTTAGAGCAGATATCAACCTACGTTGGCTTCCTGGGTTTCATTGA 2520 0.4337 MVDGSLFSGGAVGAGMQEVLRLAIEMVEKGKNFKSVLKTKKETLDALTPLVEEMKQYARELDRGTDTVASLEKEINKGKEIVEKCSKFRWWRFPSFPLYHDRIEGRNKKLGRILSVNVQTQIGRDVMEVLYNVRNILDIIRDDYGGRLGEEKVLRGVSGVPEKPEFTVGLEEPLKKLKVEVLKKHGDRVLLVTGLGGSGKSTLAKKLCWDEQVKGMFADNIFFQTVSKSPNLKSIVQTLFEHCGHRAPEFQTDEEAINRLGNLLRHVGDKGRPILLVLDDVWSGTDSIVEKFKFSTIPGYKIVVTSRFAFRRFHTQFHLKPLGDDDAVSLFHHFTQAKDTNSYKPDENLVHEIVRGCNGSPLALKVIGGSLCHHPYEFWQTMKERLKSNKDLDSHLQNCLDIVEDDKEKECFMDLGLFPEDQRIRVPLLNDMWTELHELDEDGVKAMNIIHSLDSKNLANVIVTRKVATDVEMYYNNHFLMQHDLLRELANHQSNQEPIERRKRLAIDLTQNGKNCPNWLVGQNQPGIVSRTLSFLSVRGTQQQQKQEQVTARIMFVSTDETFTPDWYNMNLAETEVLILNIHSNKYTFPDFIQKMRKLKVLIVTNQGFHPCELNNFEVLSSLPCLKRISLEKVSVPSLCKLRKLRNLSLYMCTTKQAFGSSDIKISDALPNLVELNIDYCMDMVELPSDFCNIMTMKKLSITNCHKLSKLPPEIVMLKNLEVLRLSSCSDLKEMPESVERLQQIWCLDISECISLTQLPADIGELHSLRKLYMWGCSGLNELPHSVTSFENLKHVIHVICDDEAAALWEHFKEFTSLPNLMIVKVRADINLRWLPGFH* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0033 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 404 IPR027417 -
Amo01g0033 839 Gene3D - 322 403 IPR042197 -
Amo01g0033 839 Gene3D - 151 316 IPR027417 -
Amo01g0033 839 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 5 816 IPR039203 GO:0050832
Amo01g0033 839 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 5 134 IPR008808 -
Amo01g0033 839 Coils Coil 54 74 - -
Amo01g0033 839 PRINTS Disease resistance protein signature 189 204 - -
Amo01g0033 839 PRINTS Disease resistance protein signature 268 282 - -
Amo01g0033 839 PRINTS Disease resistance protein signature 357 371 - -
Amo01g0033 839 PRINTS Disease resistance protein signature 716 732 - -
Amo01g0033 839 Gene3D Ribonuclease Inhibitor 533 805 IPR032675 -
Amo01g0033 839 ProSiteProfiles RPW8 domain profile. 1 152 IPR008808 -
Amo01g0033 839 Pfam NB-ARC domain 173 390 IPR002182 GO:0043531
Amo01g0033 839 SUPERFAMILY L domain-like 566 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0033 Amo-Chr1 892433 908587 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0033 274 794 WRKY Transcription Factor Family AT4G12020 22.470 1.92e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0033 - - lja:Lj0g3v0269369.1 1018.84