Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0016 TTTGGGGTGTTTGACGGAAATGTGACGGCGCAGCTAAAGAAATCGGTGGCACCGATTGGGGGGAAGGAAATCGGTGGGACCGATTTCTGGGAACGGGAGGTGCTGAAATCGGTGGCACCGATTGGTGACCCGTTGCCACATGTCGCGCATGCAGCTGGCTCCCGTGGTGGCCCGCCGTTGCACCACACAGCTCGCCGTCATGTTCATCTAACCCTCACACCCAGCCCTTCATCTAACCCTCACACCCATCCCTCTCTCTGTCGCACCCAACCCCGCGCCATCAACGATCTCTCGCACCCAACCCTCGCACCATCGACACAACCCTTGTTAGATTCGGAACCCTCCATCGGCGCTGCTCCGTCCACGCACTCAGTGGTCTCTGTCTCGGCGTGCCCTCCTACTCCCTCAGTGGTCTCTGTCTCGCAAACCCTCGTTGGATTCGGAACCTCAATCGTTGCTCACTCTATTTCGCAAACCCTCAATCGCCGATCCTCCCTCCGTGGTTCAGCACCCGTCGCGTTGCCGTCTCCCTCTCTGAAATCGTCGCGTCGCCGTCTCCCTCTCCCTCACTCGTCGCACCTTCGTCAGCCATGTTCAACGTTCGCAGTGCCGTGCTGTGGTAGTGCTCAGCTACTGATATGTGGTGCTCATTCTTTGAGTTTATTCTTTGCTGAATCTCGTTTGGCAGAGAATACCTCTAGATTTTTTGCAAGGCTTTTCGAAGTTGATTGTGATTTCTTTCTTTTGTATTCTCTCCAGGGAGTTCCATCTCTTTTCTCTGATCTTTCGTCTTTGTATAATCAGCCTGGGAAGGCAGACATTTTGGAACAACTTATTCTTGTATTTTTTTACAGCGCTCTTCAAGCTAAGGATAACAATGAAGAAGGGAATTTAACAAACCCAAGTAGCAGCAGCACAGCATCAAGAGAAGGGAAGAGAGGGAGTGGTGTGAGGCAATATGTGAGATCAAAGATGCCAAGGCTTTGTTGGACTCCTAATCTTCATCTCTCCTTTGTCCATGTTGTTCAGAGGCTTGGAGGTCAAGAAAGTAATTCCACTCTCAAACATTTTGATTCTTCTGTCTTGTGTCTATCTTCTGAGTATGCTACTATTGTAGTTCTAGCTTTAGTTCTTGAGAAGTTGAAACCATATGGAGGCCTTCAAGAATCATTCGAATCTGCTAAGGCAATTTCAGTGGGTGCATCAAAAGGTGTTCAAAGGCTAGGAAATCAACTGCTAATGGTGTTACAAAACACGAAAATAAAGCTGCATCTTCGTTCTGCAAACACCACTGCCAATGCTTTAAACTCTGAAAACAACATAAATAAATATATAAATATTGAAGTAGTTGTAAAATGTGTGAAGAGGAAAGGATTTGATTTTGTGCTCCTAAATCCAAAAGATTGTAAGGTGGCAGTAATGGGTGCTAGGTCTGAGCCTATCTCTGTCCAAGATATAACGCTTCAGTCTCAAGCTTTATTAAATGTTAAGGATTCAAACAAGGAATTGCTAAGCTCTATTTGTAGGTTGCGTGAAGGTGTGGGTATAGCACCATGCAATGCTGCTGAATATCGTGCAGTGATATTAGGAATGAGATATGCTCTTAAAAAGGGATTTTCTTTTATCCGTATCCAGGGCGACTCCAAGCTTGTTTGCATGCAGGTTGGCCATCTTTTATGCTTACATCAGTTAGTTTATTCTGTTCTCATGCATACAGGTTACTGTTGCCCAACAGCTTCTACACCTCTAATAGCTATACAAGAGTTGCGTGCAACCATTCGTGTGCTACAAATTAGTCTAGATGTTGTTTAG 1812 0.4614 FGVFDGNVTAQLKKSVAPIGGKEIGGTDFWEREVLKSVAPIGDPLPHVAHAAGSRGGPPLHHTARRHVHLTLTPSPSSNPHTHPSLCRTQPRAINDLSHPTLAPSTQPLLDSEPSIGAAPSTHSVVSVSACPPTPSVVSVSQTLVGFGTSIVAHSISQTLNRRSSLRGSAPVALPSPSLKSSRRRLPLPHSSHLRQPCSTFAVPCCGSAQLLICGAHSLSLFFAESRLAENTSRFFARLFEVDCDFFLLYSLQGVPSLFSDLSSLYNQPGKADILEQLILVFFYSALQAKDNNEEGNLTNPSSSSTASREGKRGSGVRQYVRSKMPRLCWTPNLHLSFVHVVQRLGGQESNSTLKHFDSSVLCLSSEYATIVVLALVLEKLKPYGGLQESFESAKAISVGASKGVQRLGNQLLMVLQNTKIKLHLRSANTTANALNSENNINKYINIEVVVKCVKRKGFDFVLLNPKDCKVAVMGARSEPISVQDITLQSQALLNVKDSNKELLSSICRLREGVGIAPCNAAEYRAVILGMRYALKKGFSFIRIQGDSKLVCMQVGHLLCLHQLVYSVLMHTGYCCPTASTPLIAIQELRATIRVLQISLDVV* 604
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0016 603 PANTHER PUTATIVE-RELATED 505 557 - -
Amo01g0016 603 MobiDBLite consensus disorder prediction 167 186 - -
Amo01g0016 603 MobiDBLite consensus disorder prediction 294 317 - -
Amo01g0016 603 MobiDBLite consensus disorder prediction 294 312 - -
Amo01g0016 603 SUPERFAMILY Ribonuclease H-like 511 560 IPR012337 -
Amo01g0016 603 Gene3D - 231 319 - -
Amo01g0016 603 Gene3D - 325 430 - -
Amo01g0016 603 Gene3D - 491 568 IPR036397 GO:0003676
Amo01g0016 603 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 505 557 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo01g0016 Amo-Chr1 701669 706080 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0016 315 347 G2-like Transcription Factor Family AT2G42660 75.758 1.73e-10 60.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0016 - - aip:110269475 194.126