Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0003 ATGGAAGAAACATTTGTTCCCTTTCGCGGGATCAAGAATGATCTCAAAGGAAGAATTCTCTGCTATAAGCAAGATTGGACCAGTGGATTCAAGGCAGGCATCAGGATCCTTGCCCCAACTACATACATATTTTTTGCATCAGCTATTCCTGTTATCTCTTTTGGGGAGCAATTAGAGAGAAATACTGATGGAACTCTAACTGCAGTGCAGACCCTARCATCGACTGCGCTATGTGGCATYGTCCATGCAATCCTTGGAGGGCAACCTCTCCTCATSCTAGGTGTAGCTGAGCCAACTGTTCTGATGTATACATTCCTATACGATTTTGCAAAGGATAGAAAAGATTTGGGGCAAAGGCTGTTCCTCGCTTGGGCTGGATGGGTATGTGTTTGGACCGCCTTATTGCTTTTTTTGTTGGCCATCCTTGGTGCATGCTCTATTATTAACAGATTCACACGCCTTGCTGGTGAACTATTCGGTCTGCTGATCGCAATGCTCTTCATGCAGCAGGCCATAAGGGGGCTAGTGGAGGAGTTTGGTGTACCACACCAAAGAGAAGGTATCAATCAGATTGCACACGAATCCTCTTGGCTGTTTGGGAATGGAATGTTCGCCTTGGTTTTGTCATTTGGCCTTCTGTTTACTGCATTAAGAAGCCGTAAAGCTAGATCGTGGCGTTATGGCACAGGTTGCTTGAGGGGATTTATAGCTGATTATGGAGTTCCTCTTATGGTTCTTATGTGGACTGCKGTGTCTTACATACCRGCYAATAATGTTCCAAGGGGAATCCCAAGGCGRCTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACSCAAATTGGACTGTAATCAAGGATATGTTGAATGTWCCTCTTATTTATATAATTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTTTACTACTTTGATCACAGTGTTGCATCCCAACTTGCTCAGCAGAAGGAATTTAATTTAAGAAGACCCTCTTCTTATCATTATGATCTTCTTCTCTTAGGCTTATTAACCATATTGTGTGGACTTATTGGAATCCCTCCTTCCAATGGTGTTATTCCTCAATCTCCAATGCATACGAAAAGCTTAGCCACTCTAAAGCATCAGCTTTTGCGGAACAAACTTGTATCTAGYGYACGAAAAAGTATTCAGAAAAACCTGAACCTGAGTCAATTATACCGAAATATGCAAGAAGCATATGATCAAATGCAAACTCCATTATCCCACCAAATGCCMCCTKCATTGGGGCTAAAGGAGTTGAAGGAATCYACAATTCAACTAGCCTCAAGTCACGGATATATTGATGCCCCTGTAGATGAGGTTGTTTTTGATGTGGACAAAGATGTTGATGACCTTTTGCCTGTTGAAGTTAAAGAACAGCGACTAAGCAATCTGCTACAAGCAATGCTGGTTGTGGCATGTGTCGCAGCCATGCCTCTTTTGAAGAAGATACCAACTTCAGTGCTCTGGGGTTACTTTGCTTTCATGGCAATTGAAAGCTTGCCAGGAAATCAATTTTGGGAGAGAATATTATACCTGTTCACTGCTCCAAGCCGAAGATATAAAGTTCTGGAGGAACAACATGCTGCCAATATTGAGATTGTGCCATTCAAAACTGTCGTCAAGTTTACCTTGTTCCAGACAGCTTACTTGCTTCTCTGCTTTGGTCTAACCTGGATACCAATTGCCGGGGTCCTTTTCCCATTGTTAATCATGCTTCTCATCCCTATAAGGCAATATTTCCTTCCTAAGTTTTTTAAAGGAGCTCATCTTCAAGATTTGGATGCTGCAGCGTACGAGGATATGCCTGCTATTCCTTTCAACTTTTTGTTTGAAGATTCAAATATTGAGGCAACAAATTTCAACACTAATGGTGGGGAAATTCTTGATGGAATTATCACAAGGAGTCGTGGGGAAATTCGCATCACACAAAGCCCAAAAACATTAAGTTCAACTCCAACACCTTCTAGTGATATTATACCTGCTAATGGAAATACCTCAAAGCATACACAGCCCTCAAGTAACTGA 2046 0.4189 MEETFVPFRGIKNDLKGRILCYKQDWTSGFKAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLXSTALCGIVHAILGGQPLLXLGVAEPTVLMYTFLYDFAKDRKDLGQRLFLAWAGWVCVWTALLLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFGVPHQREGINQIAHESSWLFGNGMFALVLSFGLLFTALRSRKARSWRYGTGCLRGFIADYGVPLMVLMWTAVSYIPANNVPRGIPRRLFSPNPWSPGAYXNWTVIKDMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRRPSSYHYDLLLLGLLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSSXRKSIQKNLNLSQLYRNMQEAYDQMQTPLSHQMPPXLGLKELKESTIQLASSHGYIDAPVDEVVFDVDKDVDDLLPVEVKEQRLSNLLQAMLVVACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVLEEQHAANIEIVPFKTVVKFTLFQTAYLLLCFGLTWIPIAGVLFPLLIMLLIPIRQYFLPKFFKGAHLQDLDAAAYEDMPAIPFNFLFEDSNIEATNFNTNGGEILDGIITRSRGEIRITQSPKTLSSTPTPSSDIIPANGNTSKHTQPSSN* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0003 681 Gene3D Helical hairpin bin 18 60 - -
Amo01g0003 681 PANTHER ANION EXCHANGE PROTEIN 1 666 IPR003020 GO:0005452|GO:0006820|GO:0016020
Amo01g0003 681 Pfam HCO3- transporter family 461 524 IPR011531 GO:0006820|GO:0016021
Amo01g0003 681 Pfam HCO3- transporter family 203 374 IPR011531 GO:0006820|GO:0016021
Amo01g0003 681 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016021
Amo01g0003 681 PANTHER BORON TRANSPORTER 2-RELATED 1 666 - -
Amo01g0003 681 MobiDBLite consensus disorder prediction 649 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0003 Amo-Chr1 148341 152980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0003 1 661 Antiporters AT3G62270 75.794 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0003 K24194 - gmx:100815420 1132.09