Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2174 ATGTTTCTGTGCCCAACGCTACTTATCCTGGCTGGGAGACGAGACACTGCCGTCCTGCATCACTCTTCATCTATGGCGGCTGCTTTCTCGACGGTGTCAAATGTCGGGTCTTTGCCGAGTCTGCGAAGCGGTACTCAGATCAGAGTTATGTATCCTATGAATAGTGCTAGTTCATTTAAGCTCACGGGATTTCCAACGCGATCGAATATATGCCCCTCATTGAGCGCCTTTGCCGGTTCGTTGCGTTTGGTACCTTCCTCTTCTCGGAATGCTTCTTCCCAAGAAAGAACGCGTTTTAACAGCTCGGTTCGGGCCAGTTCTGAGGAAACACCTTTACAATCAAAAATTACTCACAAGGTGTATTTTGACATAAGTATTGGAAATCCTGTTGGGAAGCTTGCTGGAAGGATTGTGATTGGACTCTATGGTGATGATGTGCCCCAAACAGTAGAGAATTTCCGTGCCCTTTGCACAGGAGAGAAGGGCTTCGGGTATAAAGGTTCTACATTTCATCGTGTAATAAAGGATTTCATGATTCAGGGAGGGGACTTTGACAAGGGGAATGTGAGTACTGTTCTTCATATGTTCGTCGAACTACAGTCCAAGAACCGTGGTTTACTGCCTCAGACACTTAAACTCCACTCTGTTTTGATATACACTTGGAACAGTTATAAGGGACTAGAATGGCGTTGA 693 0.4589 MFLCPTLLILAGRRDTAVLHHSSSMAAAFSTVSNVGSLPSLRSGTQIRVMYPMNSASSFKLTGFPTRSNICPSLSAFAGSLRLVPSSSRNASSQERTRFNSSVRASSEETPLQSKITHKVYFDISIGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNVSTVLHMFVELQSKNRGLLPQTLKLHSVLIYTWNSYKGLEWR 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2174 230 Gene3D - 107 207 IPR029000 -
Alju13g2174 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 170 182 IPR002130 GO:0000413|GO:0003755
Alju13g2174 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 141 156 IPR002130 GO:0000413|GO:0003755
Alju13g2174 230 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 131 188 IPR002130 GO:0000413|GO:0003755
Alju13g2174 230 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 165 182 IPR020892 GO:0003755|GO:0006457
Alju13g2174 230 SUPERFAMILY Cyclophilin-like 114 188 IPR029000 -
Alju13g2174 230 MobiDBLite consensus disorder prediction 88 110 - -
Alju13g2174 230 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 119 191 - -
Alju13g2174 230 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 132 188 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2174 Alju-ChrAlju13 38706671 38708144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2174 135 183 U-box Gene Family AT5G67530 51.020 5.82e-08 50.8