Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2158 ATGGATGACAGCGGAGGCTCCAAATTGAGTGGAATTAAACAGATAGTGAGACTAAAGGAGATGATTCAGAAGTGGCAATCAGTGACGCTGGCCTCAAAAGTGAACGGTCGGCCTTCAGGAACGAAGCACGGGGGCATAGCACCAGTAATTAACAGAAGGCTGAAGAACGTCATGTATTGTGACTCGGATGAAGAAAGCTGCCAGAGCCCTGAGCCGCCACCTGATGTTCCCAAAGGATATTTGGCAGTCTATGTCGGGCCAGAGCTTCGGAGGTTCATCATTCCCACCACCTACCTTAGTCACTCTCTATTCAAAGTGTTGCTGGAAAAGGCTGCTGACGAATTCGGCTTCGAGCAAAGTGGCGGGCTCACTATCCCATGTGAGATTGAGACTTTTAAATACCTCCTCAACTGCATGGAGAACCATCAAAGGGATCAACATGATCAAAGTTCCTGTAAGTTTTTCTGA 468 0.4786 MDDSGGSKLSGIKQIVRLKEMIQKWQSVTLASKVNGRPSGTKHGGIAPVINRRLKNVMYCDSDEESCQSPEPPPDVPKGYLAVYVGPELRRFIIPTTYLSHSLFKVLLEKAADEFGFEQSGGLTIPCEIETFKYLLNCMENHQRDQHDQSSCKFF 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2158 155 Pfam Auxin responsive protein 62 138 IPR003676 GO:0009733
Alju13g2158 155 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 56 135 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2158 Alju-ChrAlju13 38478768 38479235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2158 1 145 Calmodulin-binding Proteins AT3G43120 70.270 1.02e-74 218