Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2149 ATGGCTCTCTCCTCCACCACTCTCTCTTTCTTTATCATCTCTCTCCTCATTCTCACCCTCTCTCCTGCTTCTTCCCTCCCGCCTGAGCCCTCCCCCGCCCACTTCGTGGACTCCGTCTCCCAAGTTCTCCATGTCTTACAGCCGGTAGTCTCCGTCTTGTCCCGCTTCGCCGATTTCTCCGGACATTCTCGCCTCTCCCATGCAATTTCCGACTGCCTCGATTTGCTCGACTCCTCTTCCGACGACCTTTCCTCCTCCGCGTCTGCCTCTCAATCCCCCCATGGCAAGCATAACGGTACCGGAAACCTGAGCTGCGATCTGAGGACATGGCTGAGCGCGGCACTAGCGAATCCGGAGACATGCATGGAGGGTTTTGAAGGCACCAACAGCATTGTGAGGGGTCTGATATCCAGTGGGCTGGAACAGGTGAGCTCGCTGGTGCAGGAGCTGCTGGCCCAGGTGCACCCAGTTTCGGACCATTCCTCCGGCAGCGACAGCCGCTTTCCCCGGTGGCTGAAACCTGGGGACCGCAAGCTCATGCAAGCCAATGGGGTGCCGGTAGACGTGGTGGTAGCTTCGGATGGGACGGGAAATTACACAAAGGTGATGGATGCGGTGCTTGCAGCTCCTGACTATAGCATGAAACGCTATGTCATCTACGTCAAGAGAGGCGTCTATTTCGAGAACGTGGAGATCAAAAAGAAGAAGTGGAACCTCATGATAATTGGGGACGGCATGGATGCCACCATTATCTCCGGCAACCGTAGCTTCGTCGATGGATGGACCACCTTCCGCACTGCTACATTTGCGGTCAGCGGAAGAGGGTTCATAGCACGAGACATGGCGTTCCAGAACACGGCAGGCCCCGAGAAGCACCAGGCAGTGGCCCTCAGATCCGACTCCGACCTCTCTGTCTACTACAGATGTGGTATTCACGGATACCAAGACAGCCTCTATACCCACACCATGCGCCAATTCTACAGGGAGTGCAAGATCTCCGGCACCGTCGACTTCATCTTCGGCGACGCCACCGCCGTCTTCCAAAACTGCCAGCTGCTGGCAAGGAAGGGCCTGCCGAATCAAAAGAACACCATCACGGCTCAGGGGCGCAAAGACCCCAACGAGCCCACGGGTTTCTCGTTCCAGTTCTGTAACGTGTCAGCGGATTCGGACCTGCTGCCCTCAATGAACTACACGCAGACGTACCTGGGAAGGCCGTGGAAGAGCTACTCAAGAACGGTGTTCATGCAGTCGTACTTGAGCGAGGTGCTGAGGCCGGAGGGGTGGCTGGAGTGGAACGGCGACTTCGCCTTGGACACACTGTTCTACGCCGAGTACCAGAACTCGGGGGCGGGGGCGGCGGTGGAGAAGAGGGTCAAGTGGGGAGGGTACAGAGCGCTGAATGATTCGGCGCAGGCTTCTAACTTCACGGTGTCCGCGTTTATAGAGGGCAATCTTTGGTTACCTTCCACAGGCGTCATCTACACCGCTGGCTTAGCTGTTTGA 1506 0.5717 MALSSTTLSFFIISLLILTLSPASSLPPEPSPAHFVDSVSQVLHVLQPVVSVLSRFADFSGHSRLSHAISDCLDLLDSSSDDLSSSASASQSPHGKHNGTGNLSCDLRTWLSAALANPETCMEGFEGTNSIVRGLISSGLEQVSSLVQELLAQVHPVSDHSSGSDSRFPRWLKPGDRKLMQANGVPVDVVVASDGTGNYTKVMDAVLAAPDYSMKRYVIYVKRGVYFENVEIKKKKWNLMIIGDGMDATIISGNRSFVDGWTTFRTATFAVSGRGFIARDMAFQNTAGPEKHQAVALRSDSDLSVYYRCGIHGYQDSLYTHTMRQFYRECKISGTVDFIFGDATAVFQNCQLLARKGLPNQKNTITAQGRKDPNEPTGFSFQFCNVSADSDLLPSMNYTQTYLGRPWKSYSRTVFMQSYLSEVLRPEGWLEWNGDFALDTLFYAEYQNSGAGAAVEKRVKWGGYRALNDSAQASNFTVSAFIEGNLWLPSTGVIYTAGLAV 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2149 501 CDD PMEI-like_4 5 158 - -
Alju13g2149 501 Pfam Pectinesterase 188 485 IPR000070 GO:0030599|GO:0042545
Alju13g2149 501 FunFam Pectinesterase 182 499 - -
Alju13g2149 501 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 148 IPR035513 -
Alju13g2149 501 Gene3D - 184 499 IPR012334 -
Alju13g2149 501 SMART PMEI_2 12 153 IPR006501 GO:0004857
Alju13g2149 501 Gene3D Invertase/pectin methylesterase inhibitor family protein 18 157 IPR035513 -
Alju13g2149 501 PANTHER PECTINESTERASE 63 489 - -
Alju13g2149 501 ProSitePatterns Pectinesterase signature 2. 332 341 IPR033131 -
Alju13g2149 501 Pfam Plant invertase/pectin methylesterase inhibitor 63 139 IPR006501 GO:0004857
Alju13g2149 501 SUPERFAMILY Pectin lyase-like 185 498 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2149 Alju-ChrAlju13 38398425 38400527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2149 9 499 Carbohydrate Esterase AT3G43270 60.542 0.0 677