Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju13g2145 | ATGGGGTTCTGTGTTGAGGAGTCCATCTCAGGTTTGACATTAGGCCAAGCAATATATGAGGCTGCTCTAATAATTGCAGTTCTGAGATGGGTGTTCTGCTGGGTTTCCAAAGTCATCCATGATCGGAGGAGCCAGGCATCTTCATGGGTGAGCTGCCAGATGATAAGAGACAGTACTCTCACACTCAGGACCTTTGGCGAAATGGTGGAAAGAGTGCCAGAAACACAGGACACGTGTGCTGTGTGCCTGAACCAGTTAAGAATGGAGGATGAGGTTAGAGAGCTCATGAACTGTGACCATGCATTTCACAGAGAATGCATAGACAGATGGTTGGATTATGATCATGACAATCACAACCCCACCTGCCCACTCTGCAGAGCTCCTTTGCTCACTTCCTCTGATTCAGAAACATCTGCCTGCATGCCTCCCCCTCACCCCAGCTGGCCTGTGGAGAGGCTTCTCTATCTCTTCGGGGACGATCTCCCCCTTTGCTCTTAA | 498 | 0.498 | MGFCVEESISGLTLGQAIYEAALIIAVLRWVFCWVSKVIHDRRSQASSWVSCQMIRDSTLTLRTFGEMVERVPETQDTCAVCLNQLRMEDEVRELMNCDHAFHRECIDRWLDYDHDNHNPTCPLCRAPLLTSSDSETSACMPPPHPSWPVERLLYLFGDDLPLCS | 165 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju13g2145 | 165 | Pfam | Ring finger domain | 77 | 126 | IPR001841 | - | |
| Alju13g2145 | 165 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 23 | 160 | - | - | |
| Alju13g2145 | 165 | SMART | ring_2 | 79 | 125 | IPR001841 | - | |
| Alju13g2145 | 165 | SUPERFAMILY | RING/U-box | 78 | 132 | - | - | |
| Alju13g2145 | 165 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 57 | 133 | IPR013083 | - | |
| Alju13g2145 | 165 | ProSiteProfiles | Zinc finger RING-type profile. | 79 | 126 | IPR001841 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju13g2145 | Alju-ChrAlju13 | 38353382 | 38353879 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju13g2145 | 1 | 161 | C3H Transcription Factor Family | AT5G20885 | 47.753 | 9.57e-43 | 138 |