Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2143 ATGGCCACTCCCATGAAGGCCACCTCCAATGGCTCCTTCCAGCACGAAAACCCCCTCGACTACGCTCTTCCCCTCTTGATCCTCCAGATGTGCCTCGTCGTCGCCTTCACTCGCTTCCTTGCCCTCCTTTTACGCCCCCTCCATCAACCTCGTGTCATTGCTGAAATCATCGGAGGAATCATACTTGGCCCTTCCGCAATTGGGCGTAGCCACACATTCCTCAACACCGTCTTCCCCAAGAAAAGCCACACTGTTCTTGACACCCTTGCCAACCTTGGCCTCTTATTCTTCTTGTTTCTCGTCGGTCTCGAGCTCGACTTGCGTTCCATTCGACGAACTGGTCATAAGGCCTTATGCATTGCTGTTTCCGGCATATCCCTCCCTTTCATTCTCGGCATTGGCACCTCTTTTGTTCTTCGATCCACCATCTCCAAAGGCGTCCAACCCATCCCCCTCCTTGTCTTTATGGGAGTTTCTCTCTCCATCACCGCCTTTCCTGTGCTTGCTCGTATCCTTGCCGAGCTCAAACTCCTCACCACCGACGTTGGTCGTATTGCCATGTCTGCTGCCGCCGTCAATGATATTGCCGCCTGGATTCTTCTTGCTCTTGCCATTGCCCTCTCCGGCTCTAACGCTTCTCCTCTCACTCCTTTGTGGGTTCTGCTATGTGGTGTTGCTTTTGTCCTTTTCTGTATCTTTGCCGTCAGGCCTATTCTTGCATTCATGGCCAGGCGTTCCCCCGAGGGTGAGCCTGTTAAGGAACTCTACATATGCATCACTTTCATAATAGTCCTGGCGGCTAGTTTTGCCACAGACACCATAGGCATTCATGCCTTGTTTGGGGCATTTATCATCGGCGTTGTCATGCCCAAAGATGGTCCTTTTGCCGGGGTCTTAATTGAGAAGCTTGAGGACATCATCTCTAGCCTTTTTCTACCACTTTATTTTGTGTCTAGTGGGTTGAAAACAAATGTGGCGACTATAAGTGGAGGGACTTCTTGGGGGTTATTATTTCTAGTCATATTTACCGCTTGCTTCGGGAAGATTGTTGGCACAGTTGTTGTGTCTGCTTTATGTAAAATTCCTTTCCGAGAAGCCCTTGCTCTTGGTTTCCTTATGAACACCAAAGGCTTGGTAGAACTCATTGTTCTCAACATTGGCAAGGATCGTAAGGTACTGAATGACCAGGCATTTGCCATATGTGTACTAATGGCATTGTTCACCACCTTTATCACAACCCCAATAGTGATGGCTGTGTATAAGCCAGCTCGTAGGGGAGCTCCTTACAAGCACAAAACAATTCAACGTAAAGATCAAGATGCAGAATTGCGAGTGCTCGCTTGCTTCCACAGTACACGCAATATTCCTACTCTCATAAATCTAACAGAGTCTTCCCGCGGAACCCGAAAACGAGGTAAGCTCTGCATATATGCAATGCACTTGATGGAGCTATCAGAACGATCTTCAGCCATCTCAATGGTTCATAAGGCACGCAACAACGGCCTTCCTTTTTGGAACAAGATACGGGAGGACAGAGATCAAATGGTGATCCCATTTGAGGCCTATGGCCAACTGAGTAGTGTAAATGTTCGTCCCATGACGGCCATCTCTGCTCTCAACACCATCCACGAGGATATTTGTACCAGTGCTCACCTCAAACGAGCAGCCATGATCATCCTCCCCTTTCACAAACACCAGCGTGCTGATGGATCCATGGAGTCGCTTGGACATTCGTTCCATCTAGTAAACCAAAATGTGCTTACCCATGCTCCTTGCTCTGTGGGGATTTTGGTGGATCGTGGGCTCGGAGGGACAAGCCAAGTACAAGCCAGCGACGTGTCCTATAAAGTAATGGTGCCCTTCTTTGGAGGCCGCGACGACCGAGAAGCACTGGCCTATGGAATGAGGATGGCAGAGCACCCTGGAATTTTGCTAATAGTGGTGAAGTTTTTACCTCCCCCTGGAAATACATTCACGTTCGGGGCTAATTTAGTGGTTGTGACAGCAAACAAGGACAAGAAAGTTATAAAAGAAGGAGATATTAGTTTAGACTCTGACAAGCAAGAGGACGATCAAATGTGGTCGGAGTTCATGAGCGCTCAAAGCTCAAACCAAGAGTCAATGAGGTATGAAGAAAGATTAGTGGAGAGTAAAGGAGGTGTAATAACAGCTCTGAAGGAAATGAACAAGAGCAATCTAGTATTGGTGGGGAGGATGCCTCCAGTGGCCCCATTGGTAACCAACAGTGACTGTAAAGAATTAGGTCCTATCGGGAGCTACTTGGCATCTTCAGATTTCTCCGCCACCGCCTCAGTAGTGGTCATTCAACAATATAATCCTTCTAAAGATGTCCATCCCTTGGTGATGGAGGTATCTAATTACCCAGAGGTTCCAGACACACCAAGATGAGTGGTGATGGCGGAGGAGCCCCATTCAGGTGTTGGGCCCAGAACCAGTACTCCTCCACATGGTTGTACCTCTCAATTTGAACCACCCATATGTGGTGATCGTCGCCATGAACTGCAATCTGCCATTCACATTACTAGAAGCCTCCGATCTTCATCTGATCCCTCTTCTCTGCTGCTTCAAGGTCTGAATTACTTGAGGGACAGATTCTATCATACGCATCTTCTTACGCAGAACTAA 2646 0.4822 MATPMKATSNGSFQHENPLDYALPLLILQMCLVVAFTRFLALLLRPLHQPRVIAEIIGGIILGPSAIGRSHTFLNTVFPKKSHTVLDTLANLGLLFFLFLVGLELDLRSIRRTGHKALCIAVSGISLPFILGIGTSFVLRSTISKGVQPIPLLVFMGVSLSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDIAAWILLALAIALSGSNASPLTPLWVLLCGVAFVLFCIFAVRPILAFMARRSPEGEPVKELYICITFIIVLAASFATDTIGIHALFGAFIIGVVMPKDGPFAGVLIEKLEDIISSLFLPLYFVSSGLKTNVATISGGTSWGLLFLVIFTACFGKIVGTVVVSALCKIPFREALALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHKTIQRKDQDAELRVLACFHSTRNIPTLINLTESSRGTRKRGKLCIYAMHLMELSERSSAISMVHKARNNGLPFWNKIREDRDQMVIPFEAYGQLSSVNVRPMTAISALNTIHEDICTSAHLKRAAMIILPFHKHQRADGSMESLGHSFHLVNQNVLTHAPCSVGILVDRGLGGTSQVQASDVSYKVMVPFFGGRDDREALAYGMRMAEHPGILLIVVKFLPPPGNTFTFGANLVVVTANKDKKVIKEGDISLDSDKQEDDQMWSEFMSAQSSNQESMRYEERLVESKGGVITALKEMNKSNLVLVGRMPPVAPLVTNSDCKELGPIGSYLASSDFSATASVVVIQQYNPSKDVHPLVMEVSNYPEVPDTPRXVVMAEEPHSGVGPRTSTPPHGCTSQFEPPICGDRRHELQSAIHITRSLRSSSDPSSLLLQGLNYLRDRFYHTHLLTQN 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2143 881 Gene3D - 25 427 IPR038770 -
Alju13g2143 881 Gene3D - 512 738 - -
Alju13g2143 881 FunFam Cation/H(+) antiporter 15 25 427 - -
Alju13g2143 881 PANTHER CATION/H + ANTIPORTER 3 779 - -
Alju13g2143 881 MobiDBLite consensus disorder prediction 809 831 - -
Alju13g2143 881 Pfam Sodium/hydrogen exchanger family 33 415 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2143 Alju-ChrAlju13 38346453 38349872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2143 4 796 Antiporter Super Family AT3G17630 69.987 0.0 1111