Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2140 ATGGAAGGAAAAGTTGCAGTAAAAGAATTGGTGGAAGCTGAGGAAAAGCCACCCCACACATGTCATAATAATAGTACAGATGCGTCACAGAAGAATGATGATATTTTGAGATCCACTATTCTCAGTTTGAGTCTGAATAACCAGCAAGTGCAGGCTCACAGAATTGAAGAGCAGCCGGCAGCCCAATTGGGATTGATGCGGGACAAGCTAGAGGAAATGAAGAAAGAGAATCAGAATCTAAGAGCTATGCTATCTCAGATCACTCAACATTACGCTGCTCTTCACAATCGCCTTCTCATGACGATGCTGCCGCAGCCGCAGCAACAATCGCCTCTCAAGTCTCATAATTTGCAGGAAGACAATGAAGGAGATGAAAAGGAGGAAGCAGCGTTGCCCATCAGGCAGTTCTTGGATATCCATGATCCCTCACCTTCAGAAAGCAACAAATCAGAAGGACTTATTTCTCACAGAAACAGCATCACGTGCACCAAACCTGCATGTGAAGCTAACAGCAATAATAATGCGAAAAACATAGAATCTGATCAGGCAAATTCCTGCAGAAAAGTTAGGGTGTCCATAAGGACACGTTCGGATCTTTCTTTGATTGGTGACGGGTGTCAATGGAGAAAGTATGGACAGAAGATAGCCAAGGGAAACCCATGTCCTAGGGCTTACTATCGCTGCAACATGGGAACTGCGTGTCCAGTTCGGAAGCAGGTGCAAAGGTGTGCTAAGGATAAGAGTGTTGTGATCACAAGCTATGAGGGGAAGCATAACCACGCAGTGCCTGCAGCAGCTGCGCCTGTGGCGGCCGCCACGTCGGCAGCGCTGAACATGTTCCTCTCAGGCTCAACCACAAGTGCGCAAGGAAGCACACAATCAAACTCAGGCCTCTTGTCTTGTTCCTTTGCTTCCTTGCCTACAAGCTCATCATGTCCAACCATAACACTGGACTTGACCCAACCCTCCAATCAATACATGCAATTCCAAATGTCTGCCTCGTCAAGCCACTCCCTCCACCCATTTCCCTTTGCCTTGGATGGTTATGACTCATCCTTGTCTGCCAAGAACATGTCCTTGGTAGATGCCATCAGTGCGGCTTTGGTTAAAGATCCTTCGTTCAAGGCCGCTTTAGCTGCCTCCATTTCTTCATTTTCTGGAGCCACTTCATTACAGCGTTAA 1182 0.4721 MEGKVAVKELVEAEEKPPHTCHNNSTDASQKNDDILRSTILSLSLNNQQVQAHRIEEQPAAQLGLMRDKLEEMKKENQNLRAMLSQITQHYAALHNRLLMTMLPQPQQQSPLKSHNLQEDNEGDEKEEAALPIRQFLDIHDPSPSESNKSEGLISHRNSITCTKPACEANSNNNAKNIESDQANSCRKVRVSIRTRSDLSLIGDGCQWRKYGQKIAKGNPCPRAYYRCNMGTACPVRKQVQRCAKDKSVVITSYEGKHNHAVPAAAAPVAAATSAALNMFLSGSTTSAQGSTQSNSGLLSCSFASLPTSSSCPTITLDLTQPSNQYMQFQMSASSSHSLHPFPFALDGYDSSLSAKNMSLVDAISAALVKDPSFKAALAASISSFSGATSLQR 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2140 393 MobiDBLite consensus disorder prediction 1 21 - -
Alju13g2140 393 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 50 387 IPR044810 GO:0003700
Alju13g2140 393 MobiDBLite consensus disorder prediction 1 31 - -
Alju13g2140 393 MobiDBLite consensus disorder prediction 106 127 - -
Alju13g2140 393 Coils Coil 63 90 - -
Alju13g2140 393 SMART WRKY_cls 202 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju13g2140 393 ProSiteProfiles WRKY domain profile. 197 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju13g2140 393 Pfam WRKY DNA -binding domain 204 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju13g2140 393 Gene3D WRKY domain 186 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju13g2140 393 SUPERFAMILY WRKY DNA-binding domain 194 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2140 Alju-ChrAlju13 38333176 38335402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2140 66 321 WRKY Transcription Factor Family AT4G04450 38.487 1.04e-58 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju13g2140 WRKY 1.2e-21 CL0274