Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2136 ATGGTCATACTAAGACTGGGCAACTCCCAGGCGGAGAAGAAAGAAGGAACGAGGCTTGCCAATTACGAAGTTAGTACGACTCTGGGCACTGGCAGTTTCGCAAAGGTGAAATTGGCCAAACATATCAATTCTCACCAACTCTTTGCCCTCAAGATCATCGACAAGAACAAGATCTTCCAACTCCATATCGCTCATCAGATAAAGAGGGAGATAGCCACCCTCAAGCTTCTCAAGCATCCCAACATCGTCAGATTACACGAGGTTTTGGCCAGCAAAACGAAAATTTACATGGTGTTGGAGTACGTCAATGGAGGAGAGTTGTTTGACAGAATTGCGTCCAAAGGTAGGCTTAAAGAAGCAGAAGGTAGGAAGCTTTTCCAGCAGTTAATTGACGGTGTGAGCTACTGTCACAATAAAGGTGTCTTCCACAGGGATCTTAAGCTGGAGAATGTACTAGTTGATGCCCAAGGCAACATAAAGATAACCGATTTTGGCCTCAGTGCTTTGCCCCAGCACATTAGGGCCGATGGGTTGCTGCATACAACCTGTGGAAGTCCCAGCTATGTTGCTCCAGAGGTCCTTGCAAATAGAGGCTATGACGGTGCAACATCAGATACATGGTCATGTGGTGTCATCTTGTTTGTAATTCTAACGGGATATCTCCCTTTTGAAGATCGGAACATCGTCGTTCTCTATCAGAAGATATCTAAAGGAGATGTCCGGATACCAAAATGGCTATCACCTGGAGCCCAAAACTTGGTAAGGAGGATTCTTGACCCCAATCCTCTTACCCGGATAACCCTGGCCGGTATCAAAGAAGATGAATGGTTCAGGCAGGACCATGTTCCAACAAATCCTGGGGACGACGGAGATGAAGAGAAACAGAATGTGTATATCGATGATGAAGCCTTTTCAATCCATGACGCGCCACATGAAGCAGAACAGAAGAGTCTTGAGTCCTCAACCCTTATCAATGCATTTCAGTTGATAGCAATGTCTTCATGGTTAGACCTCTCAGGCTTTTTTGAGAAAGAGCATGTTTCTGAAAGAAAGATGAGATTTACATCCAACCATTCAGCAAAAGATCTCATAGCAAAGATTGAAGATATTGGAACAGAAATGGGATTTAGAGTCCAGAAGAAAAATGGAAAACTGAAAGTGATCCAAGAGAATAAGGCGCACAGCAGAAGTCTAGGTGGCCTCTCGGTGGCGGTAGAGGTTTTTGAAATAAATCCATCCTTGCATGTGGTAGAGTTGTGTAAATCGTATGGAGACTCTTCTGTATATGGAAAGTTACGCAAGAAGCTATCAGATGATTTGGCATTAGCCCCGGGCCTAGCGCGTGGAGAATCAGACAAGTGA 1362 0.4471 MVILRLGNSQAEKKEGTRLANYEVSTTLGTGSFAKVKLAKHINSHQLFALKIIDKNKIFQLHIAHQIKREIATLKLLKHPNIVRLHEVLASKTKIYMVLEYVNGGELFDRIASKGRLKEAEGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLVDAQGNIKITDFGLSALPQHIRADGLLHTTCGSPSYVAPEVLANRGYDGATSDTWSCGVILFVILTGYLPFEDRNIVVLYQKISKGDVRIPKWLSPGAQNLVRRILDPNPLTRITLAGIKEDEWFRQDHVPTNPGDDGDEEKQNVYIDDEAFSIHDAPHEAEQKSLESSTLINAFQLIAMSSWLDLSGFFEKEHVSERKMRFTSNHSAKDLIAKIEDIGTEMGFRVQKKNGKLKVIQENKAHSRSLGGLSVAVEVFEINPSLHVVELCKSYGDSSVYGKLRKKLSDDLALAPGLARGESDK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2136 453 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 15 425 - -
Alju13g2136 453 FunFam Non-specific serine/threonine protein kinase 13 101 - -
Alju13g2136 453 Gene3D Transferase(Phosphotransferase) domain 1 104 283 - -
Alju13g2136 453 FunFam Non-specific serine/threonine protein kinase 321 443 - -
Alju13g2136 453 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g2136 453 Gene3D Kinase associated domain 1, KA1 319 442 - -
Alju13g2136 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Alju13g2136 453 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g2136 453 ProSiteProfiles NAF domain profile. 319 343 IPR018451 GO:0007165
Alju13g2136 453 Pfam NAF domain 322 380 IPR004041 GO:0007165
Alju13g2136 453 SUPERFAMILY Protein kinase-like (PK-like) 20 288 IPR011009 -
Alju13g2136 453 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Alju13g2136 453 CDD CIPK_C 325 440 - -
Alju13g2136 453 FunFam Non-specific serine/threonine protein kinase 15 321 - -
Alju13g2136 453 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g2136 453 Gene3D Phosphorylase Kinase; domain 1 8 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2136 Alju-ChrAlju13 38314874 38318642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2136 85 443 CBL-interacting serine-threonine protein kinases AT3G17510 66.852 1.83e-170 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Alju13g2136 Pkinase 2.7e-69 CL0016