Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2131 ATGTCCTCTCTAATTCTCTCCAGCACCACAGCAGGGTTTGCTCGTCCACGGATATTTGACATCAACAAAATGGCATCGGATCTGAATTCAGGACTGTCCAAGAAAACATTTGTTTTTGGTTTGAAATTGTGGGTATTGATGGGGATAACCGTTGGTTTGTTCATTGTGATAATTCTTGTGGTGTTAATATGTCTTACTTCACGAAAGAGATCCAAAAGTGCCAATGACGAGGCTCCCTTTAGCCATATGTCATCAATTTTGGAAGATATCAAAGAGATTAGAGTTGATCAAGTTTCAGCTAATGACCATTTGCAGAATGGTGCTTTTATGAGTCTGAATGACAAATTTAGTGACAGGGATTCTGAGAAGGTTTTGATCCAAACAAAAAATGGGGATACTAGCAGTCAATCAGGTTCATTTAATCATATGGAGAAAGATGCTGCCAGTTCTCAATCTGGTGGAGAAAACGGTGCTATGACCATTTCTGCATACAAGTCATCTTTACATCCTATAACTGCGCCGTCACCATTGTCTGGTCTGCCTGAATTCTCTCACCTTGGCTGGGGCTACTGGTTTACATTAAGGGACTTAGAACTTGCAACAAACAGGTTTTCAAGAGACAATGTTATTGGTGAAGGTGGGTATGGAGTTGTTTATCGTGGTCAGCTACTTAATGGGACTCCAGTGGCTGTTAAGAAGCTACTCAATAATTTAGGACAAGCTGAAAAGGAATTTAGAGTGGAGGTTGAGGCTATTGGTCATGTGCGCCATAAAAACTTGGTTCGACTTTTGGGTTATTGCATTGAAGGGACTCACAGGTTGCTGGTTTATGAATACGTTAACAATGGCAATTTAGAGCAATGGCTTCATGGAGCCATGCGGCAATATGGGTATCTAACTTGGGATGCACGAATGAAAGTTCTGCTTGGCACTGCTAAAGCGCTGGCTTACTTGCATGAGGCAATTGAACCTAAAGTGGTCCATCGGGACATTAAGTCGAGCAATATTCTAATTGATGATGACTTCAATGCCAAAATATCTGATTTTGGGCTCGCTAAGTTGCTTGGCGCTGGGAAAAGTCATGTTACAACTAGGGTAATGGGTACTTTTGGATATGTGGCTCCGGAATATGCCATTTCTGGCTTGCTAAATGAGAAGAGTGATGTTTATAGCTTTGGGGTATTGCTTCTGGAAACAATTACTGGTAGGGACCCAGTGGATTATGGTCGACCAGCAGTTGAGGTAAAGTTGGTAGATTGGCTAAAGATGATGGTAGGGAGTAGGCGTTCAGAAGAGGTAGTGGACCCCAACATGGAGACTAGGCCATCAACAACTGCCCTTAAACGAGCCCTTTTGACTGCTTTGAGGTGTGTTGATTCCGATGCTAAGAAAAGACCAAAGATGAGTCAAGTTGCCCGTTTGCTTGAATCGGAGGAATATCCCATACCAAGAGAGGATCGAAGACGCCGCCGAAAAATTCAGGCAGGAAACTCAGAGTGGCAGGGCCAGAGGGAGACTTCTGACACACAAAAAGTGTGA 1539 0.4308 MSSLILSSTTAGFARPRIFDINKMASDLNSGLSKKTFVFGLKLWVLMGITVGLFIVIILVVLICLTSRKRSKSANDEAPFSHMSSILEDIKEIRVDQVSANDHLQNGAFMSLNDKFSDRDSEKVLIQTKNGDTSSQSGSFNHMEKDAASSQSGGENGAMTISAYKSSLHPITAPSPLSGLPEFSHLGWGYWFTLRDLELATNRFSRDNVIGEGGYGVVYRGQLLNGTPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQYGYLTWDARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYAISGLLNEKSDVYSFGVLLLETITGRDPVDYGRPAVEVKLVDWLKMMVGSRRSEEVVDPNMETRPSTTALKRALLTALRCVDSDAKKRPKMSQVARLLESEEYPIPREDRRRRRKIQAGNSEWQGQRETSDTQKV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2131 512 Gene3D Transferase(Phosphotransferase) domain 1 280 493 - -
Alju13g2131 512 FunFam Putative receptor-like protein kinase 186 279 - -
Alju13g2131 512 CDD STKc_IRAK 210 476 - -
Alju13g2131 512 MobiDBLite consensus disorder prediction 467 495 - -
Alju13g2131 512 MobiDBLite consensus disorder prediction 496 512 - -
Alju13g2131 512 MobiDBLite consensus disorder prediction 128 156 - -
Alju13g2131 512 ProSitePatterns Protein kinases ATP-binding region signature. 210 233 IPR017441 GO:0005524
Alju13g2131 512 FunFam Putative receptor-like serine/threonine-protein kinase 280 491 - -
Alju13g2131 512 SUPERFAMILY Protein kinase-like (PK-like) 188 477 IPR011009 -
Alju13g2131 512 Pfam Protein kinase domain 205 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g2131 512 Gene3D Phosphorylase Kinase; domain 1 187 279 - -
Alju13g2131 512 SMART serkin_6 204 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g2131 512 ProSiteProfiles Protein kinase domain profile. 204 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g2131 512 MobiDBLite consensus disorder prediction 467 512 - -
Alju13g2131 512 PANTHER OS01G0323000 PROTEIN 27 501 - -
Alju13g2131 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 326 338 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2131 Alju-ChrAlju13 38282686 38286431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2131 40 478 Trihelix Transcription Factor Family AT1G70460 38.964 2.57e-93 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Alju13g2131 Pkinase 1.1e-46 CL0016