Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2130 ATGCTCAATATATGCAATAATCTTCTCAAGTTGAAGAAGTTGATTTCGCTACTTGTATTAGTTCTAGGACTGATATGGAACTCTCGGTTGTTACTTCTATCATCTAGTATTGTTTATCCTGTTAGGGAAGATTGGAGGATCATGGGCTTCTTCAGCTGTTGCAAAAAAGGTGATGATCACCAGGCTCCTGATACTGGACCCTTCGTGCTAAAGCCAAGCTATCCCACTGGGATCAGTGGTTATACTGGTAGACAGTTTTCAATTACCACTTCTCAAACTGTTGATATTCAGCCCATTGCCGTCCCTCCCATTTCAGTTGATGAAATGAAGTCTCTGACTGATAATTTTGGCACAAAATCTTTCATTGGTGAGGGGGCTTACGGTAAGGTGTATCATGGTGTATTGAAAAATGGGCGTAACATGGCGATTAAGAAGTTAGATTCCAGCAGGCAACCAGAACATGAATTCCTTGCTCAGGTCTCAATAGTATCAAGGCTGAAGCATGAAAATGTTGTCGAGCTTCTTGGTTATTGTGTTGACGGTGCTTTCCGAGCCCTGGCCTATGAGTATGCTTCTAAAGGAACTCTCCATGATATTCTACACGGACGAAAAGGTGTGAAGGGTGCACAAGCAGGTCCAACATTGTCATGGGCGCAAAGAGTCAAAATTGCGGTGGGGGCAGCTAGAGGGATTGAATATCTGCACGAAAAAGCAGAGACTCGTATAGTCCACCGTTATATCAAGTCTTGCAACATACTACTTTTCGAAGATGATGTGGCAAAGATTTCTGATTTTGATTTGTCAAATCAAGCCCCTGATACTTGTGCTCGTCTCCATTCCACCCGTGTTCTCGGAACCTTCGGTTATCATGCTCCTGAATATGCTATGACGGGTCAGCTCACCTCGAAGAGTGATGTCTACAGTTTTGGAGTAGTACTTCTAGAACTCTTAACAGGACGCAAACCTGTTGATCATACGCTGCCGCGGGGGCAGCAGAGCCTTGTCACCTGGGCAACGCCAAAACTGAGTGAAGACAAGGTGAGACAGTGCGTGGATGTGAAATTAAAGGGAGAATACCCTCCAAAGGCAGTTGCAAAGATGGCTGCTGTAGCTGCACTGTGTGCGCAATATGAAGCTGAGTGTCGGCCAAATATGAGCATTGTAGTGAAAGCTCTACAGCCTTTGCTTAATCCTCGCCCTTCCTTTAACGCAAGGCAACCTCCCGACTTGTAA 1233 0.4501 MLNICNNLLKLKKLISLLVLVLGLIWNSRLLLLSSSIVYPVREDWRIMGFFSCCKKGDDHQAPDTGPFVLKPSYPTGISGYTGRQFSITTSQTVDIQPIAVPPISVDEMKSLTDNFGTKSFIGEGAYGKVYHGVLKNGRNMAIKKLDSSRQPEHEFLAQVSIVSRLKHENVVELLGYCVDGAFRALAYEYASKGTLHDILHGRKGVKGAQAGPTLSWAQRVKIAVGAARGIEYLHEKAETRIVHRYIKSCNILLFEDDVAKISDFDLSNQAPDTCARLHSTRVLGTFGYHAPEYAMTGQLTSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDVKLKGEYPPKAVAKMAAVAALCAQYEAECRPNMSIVVKALQPLLNPRPSFNARQPPDL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2130 410 Gene3D Transferase(Phosphotransferase) domain 1 192 403 - -
Alju13g2130 410 ProSiteProfiles Protein kinase domain profile. 116 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g2130 410 SUPERFAMILY Protein kinase-like (PK-like) 93 392 IPR011009 -
Alju13g2130 410 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Alju13g2130 410 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 83 401 - -
Alju13g2130 410 Pfam Protein tyrosine and serine/threonine kinase 120 392 IPR001245 GO:0004672|GO:0006468
Alju13g2130 410 FunFam pto-interacting protein 1 192 403 - -
Alju13g2130 410 Gene3D Phosphorylase Kinase; domain 1 81 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2130 Alju-ChrAlju13 38275204 38280461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2130 95 401 Receptor kinase-like Gene Family AT3G58690 45.659 5.36e-84 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Alju13g2130 PK_Tyr_Ser-Thr 1.1e-46 CL0016