Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2114 ATGCGTTTCGGGCGACTCTGCTCACTGGTGTTGGGTTTAGCTGCTATAGGATTTGGCGGTAAAGACCTGAGTGGTAATAAAAGAACGAACAAAGAACATTCTTTTGATCAAAAGTTTGAGAAGTCTAATTTCGCTCTCAAAGTTAGTTGTTTGAAAGGTTATCCGGTTCGCGTGGTGAGATCCCATAAAGAGATACGCTCTTCCTATGCCCCCGAGAAAGGGTGTCCGTATGATGGGGTATACAGAATCGAGAAATGCTGGCAGACACTGGGAATGCAGGTGAACATACGATATCTCCTTGTTCTCTTATGGACTCTCTTGGTTCTTGATTATATTTCATGCAACTTCTCTGATAAAATATTCTTATTCAGGGATTCGAAGTTTGCCGGAGGAAGAATCTTGCTGGAAGTGGATGAAACCACCGCCACGCAGTCGAATCCCCGTACAAGGGTCAAGGAGAGGGATAAGAAAAACCCAGAATATGTCAATCAGGGAAAGATTACTGAAAGCTTTCGGCGAATGTTATATTTTTACTCTCTTGAGCTTCTGCATACAGAATTCGGTTGCCTTATTTGCAAGCAAGTTATGGCTTCTCCAGTTACGACGCCCTGTGCTCATAATTTCTGCGAGTCATGTGTGAAAGGGGCATTTGCGGGTCGGTCTTTTCTGAAAGCTAAAGCTGAAGAAAATGGAGATTCGGCGGATGGAGATGAAGATGAGGAAGTAGATGGGGAATCCGATGGCCAGGAAACAGAGCCAAGAGAACTTGAAGTGACCAATGAGGAGGCAGATGCTGGAGCCAATGACAATGGTAAAAGAAAGAGAGATGATGCTGAACAAGTTTCCTTTGCCCATTCGGGCCTCAGTGAATTCCTATTGTTATTCTACACAGTTCGAGAAGTCCAACTCTATGTGATAGGCAGGCGACCTCAAGTGCAAGTGAATGTAGTTGACCAGCAGCCCCATGGTTGA 972 0.4475 MRFGRLCSLVLGLAAIGFGGKDLSGNKRTNKEHSFDQKFEKSNFALKVSCLKGYPVRVVRSHKEIRSSYAPEKGCPYDGVYRIEKCWQTLGMQVNIRYLLVLLWTLLVLDYISCNFSDKIFLFRDSKFAGGRILLEVDETTATQSNPRTRVKERDKKNPEYVNQGKITESFRRMLYFYSLELLHTEFGCLICKQVMASPVTTPCAHNFCESCVKGAFAGRSFLKAKAEENGDSADGDEDEEVDGESDGQETEPRELEVTNEEADAGANDNGKRKRDDAEQVSFAHSGLSEFLLLFYTVREVQLYVIGRRPQVQVNVVDQQPHG 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2114 323 Gene3D - 13 104 IPR036987 -
Alju13g2114 323 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 158 231 IPR045134 -
Alju13g2114 323 ProSitePatterns Zinc finger RING-type signature. 204 213 IPR017907 -
Alju13g2114 323 MobiDBLite consensus disorder prediction 232 248 - -
Alju13g2114 323 MobiDBLite consensus disorder prediction 249 278 - -
Alju13g2114 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 232 IPR013083 -
Alju13g2114 323 SMART G9a_1 2 106 IPR003105 -
Alju13g2114 323 Pfam RING-type zinc-finger 189 213 IPR027370 -
Alju13g2114 323 ProSiteProfiles Zinc finger RING-type profile. 189 213 IPR001841 -
Alju13g2114 323 Pfam SAD/SRA domain 25 93 IPR003105 -
Alju13g2114 323 SUPERFAMILY RING/U-box 180 216 - -
Alju13g2114 323 MobiDBLite consensus disorder prediction 227 278 - -
Alju13g2114 323 ProSiteProfiles YDG domain profile. 1 108 IPR003105 -
Alju13g2114 323 SUPERFAMILY PUA domain-like 17 94 IPR015947 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2114 17 227 C2H2 Transcription Factor Family AT5G39550 39.574 2.07e-39 144