Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2103 ATGAGTTTTGTGTTCAGATTATGCCCCTGCTTGAGCAAGAGGTTCAAGGCCAACGCAGCCTCTGATTCCAATAATCCTCAGGCAGCCAACGATGTTTCCGACACGTGTGATCTCTTCTTCGACCTCCACTCTCTGCAGCTAGCCACCAACTTCTTCTCCGAGTTGAATCAATTAGGTCATGGAGGGTTTGGTCCTGTTTACAAGGGTTTGATGCCAAATGGTCAAGAAGTAGCTGTGAAGAAGCTTTCTGTGGAATCAAGACAAGGAAATAGAGAATTTATCAATGAGGTCAAACTACTTCTGAGAATTCAGCACAAGAACTTGGTTACATTATATGGTTGTTGTGCTGAAGGACCTGAAAAGATGCTTGTTTATGAGTATCTTCCAAACAAGAGTCTTGATCACTTTCTCTTCGATAAAAGAAAGTCACCATCTCTAGATTGGGCAACACGATTTAAAATAGTTACAGGTGTGGCAAGAGGACTTCTGTACCTGCATGAAGAGGCCCCGATAAGAATCATTCATAGAGACATCAAAGCTAGTAACATTTTGCTGGACGAGAAGTTAAACGCAAAAATTTCAGACTTTGGCCTGGCAAGACTATTTCCTGCGGATGACACTCATATGCAGACATTTAAGATTTCTGGTACACATGGTTATATGGCTCCGGAATATGCAATGCGTGGATATTTGTCTGTGAAGACAGATGTTTTCAGTTATGGAATATTGTTATTAGAAATTGTTAGTGGGAGGAAAAACCATGACCGGCTACTTGGAGAGGAGGCAGATCTGTTGAACCATGCATGGAAGCTATATCAGGCAGGGAAGATAATGGATTTGATTGACCCAAGCCTAGCGAAATACAATGGTGACGAGGCAGCAATGTGCATTCAGCTGGGCTTGTTGTGCTGCCAAGCAAGCATATCAGAGAGACCTGATATGAATGCCGTTCATCTGATGCTCTCAAGTGATTCCTTCACTTTGCCCAGACCTAGTAAACCTGGAATTCAAGGCCGTGTAGGGCGTTGGACTACGACCTCATCCTCTGCTTTCACCCATACTAATGCTACTAGTGCAACCAAGGCTTCTGGAGGAAGTAGTATCGTAGAGGACTATTCTAGAAATTCTATCTCCACTTCTTCCTTTGATGAAGGAAGGTGA 1161 0.4324 MSFVFRLCPCLSKRFKANAASDSNNPQAANDVSDTCDLFFDLHSLQLATNFFSELNQLGHGGFGPVYKGLMPNGQEVAVKKLSVESRQGNREFINEVKLLLRIQHKNLVTLYGCCAEGPEKMLVYEYLPNKSLDHFLFDKRKSPSLDWATRFKIVTGVARGLLYLHEEAPIRIIHRDIKASNILLDEKLNAKISDFGLARLFPADDTHMQTFKISGTHGYMAPEYAMRGYLSVKTDVFSYGILLLEIVSGRKNHDRLLGEEADLLNHAWKLYQAGKIMDLIDPSLAKYNGDEAAMCIQLGLLCCQASISERPDMNAVHLMLSSDSFTLPRPSKPGIQGRVGRWTTTSSSAFTHTNATSATKASGGSSIVEDYSRNSISTSSFDEGR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2103 386 FunFam Cysteine-rich receptor-like protein kinase 41 128 327 - -
Alju13g2103 386 ProSiteProfiles Protein kinase domain profile. 52 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g2103 386 Gene3D Transferase(Phosphotransferase) domain 1 128 327 - -
Alju13g2103 386 SMART serkin_6 52 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g2103 386 FunFam Cysteine-rich receptor-like protein kinase 2 17 127 - -
Alju13g2103 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Alju13g2103 386 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 37 357 - -
Alju13g2103 386 SUPERFAMILY Protein kinase-like (PK-like) 36 321 IPR011009 -
Alju13g2103 386 CDD STKc_IRAK 58 321 - -
Alju13g2103 386 Gene3D Phosphorylase Kinase; domain 1 13 127 - -
Alju13g2103 386 Pfam Protein tyrosine and serine/threonine kinase 55 318 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2103 Alju-ChrAlju13 38016621 38018721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2103 7 336 Receptor kinase-like Gene Family AT4G21410 49.419 5.84e-112 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju13g2103 PK_Tyr_Ser-Thr 1.1e-48 CL0016