Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2094 ATGCCGATCTTCTCCTTTATATCTCAGTGTTTCGTCCCCAGTGTAAGTGAAAACGATGCTTCGACCCCTAAGAATTGCGAGGTGAAGGGTAATCAGATAGTGAGTGTGAGTGTTGAGGTAACAAGCAGCCGTTGCAGCCCCGTCCAATCAGTGCCTGTGGTTTCTGGAGCACCGATCGGCCATGTTCGATCTGAGGTAATGAGCAGCCACGACAACAGAAGTAAAATTTTCAAATATTCTGAACTTAAAATAGCAACCGACAATTTTGACTCCGAGAGAGAACTTGGGAGAGGAAAACATGGGACAGTATACCTTGGAATTCTCAAAGATGGGCATTCTGTCGCAATAAAGCAGTTGCATGAAGACAAGTTAAAAGCCCTGAGGCTACATGATGAGAAACTCCACAGCGAGAAAGTGGAAAAGTTCATGAGAGAAGTTTCATTGTTAACTTCTGTGAGCCATGAAAACCTTGTCCAACTGTACGGCTGCATCTCTTCTCAAAGCAGTGAACTACTTCTAGTGCAAGAATACATGTCCAAAGGAGATCTTACTAAATGTCTTCTTGATTCCCTGCGGCAACCCGGTTCACTCCCCTGGAGTACCCGCTTAAATATTGCAATACAAACAGCAAGTGCATTGGCTTATCTCCATTCTCGTAATATAATACATCGTGATGTGAAAACCAGCAATATTCTGCTTGACCATAGTTTCCATGCTAAAGTTGCTGACTATGGATTGTCACATGTTTTCCCACTAGGTTTTGTTACCCATATCACAACTGATCCTGAGGGGACTCCTGGTTATATTGATCCAGAGTATTATGAGCATTGCCATCTTTCTGATAAGAGTGATGTATATAGCTATGGGGTGGTGCTGATTGAGCTGATATCATCCCTGCCAGCATTTGGTGAGGATGATGAACATCCCCGCCTTTCTGATTATGCTGTCAGTAAAATCCGAGGCAGACAACTTGGAAGCCTTGTAGATCCTTCTCTTGGATTTGAATCAGATGACTGGATAACTCGAACAATTAGTGCAGTGGCAGAGTTGGCATGTAACTGTTTGCAACGCCACAGAGACAGGAGACCTTCCATGGCTGAAGTGTTGGATAGCCTCAAGAGCATTAAAAGTACGAGAACTGGAAGTTCTCTTTTCTGGTCTCCAAATAGTTTGTAA 1176 0.4354 MPIFSFISQCFVPSVSENDASTPKNCEVKGNQIVSVSVEVTSSRCSPVQSVPVVSGAPIGHVRSEVMSSHDNRSKIFKYSELKIATDNFDSERELGRGKHGTVYLGILKDGHSVAIKQLHEDKLKALRLHDEKLHSEKVEKFMREVSLLTSVSHENLVQLYGCISSQSSELLLVQEYMSKGDLTKCLLDSLRQPGSLPWSTRLNIAIQTASALAYLHSRNIIHRDVKTSNILLDHSFHAKVADYGLSHVFPLGFVTHITTDPEGTPGYIDPEYYEHCHLSDKSDVYSYGVVLIELISSLPAFGEDDEHPRLSDYAVSKIRGRQLGSLVDPSLGFESDDWITRTISAVAELACNCLQRHRDRRPSMAEVLDSLKSIKSTRTGSSLFWSPNSL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2094 391 SUPERFAMILY Protein kinase-like (PK-like) 66 372 IPR011009 -
Alju13g2094 391 Gene3D Transferase(Phosphotransferase) domain 1 178 384 - -
Alju13g2094 391 ProSitePatterns Protein kinases ATP-binding region signature. 95 117 IPR017441 GO:0005524
Alju13g2094 391 Gene3D Phosphorylase Kinase; domain 1 61 177 - -
Alju13g2094 391 ProSiteProfiles Protein kinase domain profile. 89 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g2094 391 Pfam Protein kinase domain 90 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g2094 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Alju13g2094 391 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 38 379 IPR044652 GO:0004672
Alju13g2094 391 SMART serkin_6 89 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2094 Alju-ChrAlju13 37942369 37944272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2094 76 377 Receptor kinase-like Gene Family AT1G25390 48.525 5.58e-90 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Alju13g2094 Pkinase 1.1e-48 CL0016