Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2088 ATGGATTCACCAACCCCCTCAGTGCACACTCCTCGTCATCGTCCCAATGTTTCCGAGTCTCATGCTCATCATCCCGAAGAAAAGGTCCGCCTTATGTACAGCTATGGCGGACGAATCGTCCACCGCCCATATGACAAGTCCCTCTGCTATGTCGGCGGCGACACCCGCGTCGTAGTGGTCCACCGGCATTCTTCCCTCAGAGAACTCTGTATCCGTCTCTCTCGTGTCCTCCACCTCCATGGCCGACGTCCTTTCATCCTCAAGTATCTTCTTCCCGGTCAAGACCTTGACAGTCTCATATCAATAATCCACGATGAAGACCTACAACTCATGATCCAAGAGTATGATCGTGTAATAACTTCATCCTCTCCTCTCAAACCTTCGCGTCTGAGGCTGTTTTTGTTCTTTTGTGATCAGCCAGAGACTGCTATTCCAATCCATGCCCATGACGCCAAGCAAGAGACAAGGTTCGTGGACGCTATTAATGATTCTAGGATTCTCTCTCGGCTTGTGTTAGATGCTTCCGCTGCTGATCGCTCGGAGAAACCTGGCGGGCCTCCTCCGAATGAGTATGACCATAATTTGGAGGCTTTGTTTGTGACTCAAAACAATAAACAGATCAAGAGTTTGGCTGATGTGGCCGACACATCGCCTTCTGGGTCTCTTTCTTCGTCGCCCTCCACGTTTAGCCTGACTTCACCTGGGGTCGATGATAGTGGCAGCCGACTGAAGCAACAACAGTGCCAGATGGAGGACCTGTTTGCCCAATTGAACTTTGCTACGACCGATGACATGATGAAGCAAGACGATGGGTGTGCCGTTTCCTCTGCCTCTTTGGCACCACCAGTGATGGTCACTGGCCATAACATGAATGGGGTTACTTGTGATGCACTGGCTTCAGAATTAACTCCTTCTCCGTTGCAGCATGTGCGTGCAAGAGCAAGCGAGGCTTTAAGTTTGCTTTCTCCCAATTCAGTTACCAGTGAGAACAGAATTGCATCAAGCTGCAGTCATTTGTCACAGCCTGTTCACTTGCAAGAGCAAGCAAATATGAGGAGTGAAATATCTGATGCCAACCCTGCAATCCAAAGGGATAAAGTTGAAGAAAGTGGATACAGGTCAGCCACACAAGTGAATCAAAATCAAGAAATGGAGCAATTTGTCCAGTGCGTGCAGCAGGTAGCAATCCCATGCTACTACCCAGTTTATGCAATACTACCAGTGGTGGCTACTCATCCAACCGGGGCTTCCTCAGGGAAGCCACTGCTTACAGTAACACCCCAAATCGGGACTGCTTCAACAGTTTACAACAATGCCACTCCAATTGTTAACGCAGCATCAAATCCTGCATTTCTTCAACCTGCTCAATTTCACCAACACTACTATGTGGATTTCCCTCAATTCCATTATTGCCCGCTACAGTCTAATATTGCTTTTGCTCCATCTCCTCATGGTTTTGAACATCAGAGCACTGCCAAATATGTAGCTAACTCTGTTCTGTTTGAATCCACGAGGCCAAGGGATTCACGTAAGGGAATTAGCACAGGTGATGCAACAGCAATAGCATTACTCTCGGAATCCTAG 1584 0.4823 MDSPTPSVHTPRHRPNVSESHAHHPEEKVRLMYSYGGRIVHRPYDKSLCYVGGDTRVVVVHRHSSLRELCIRLSRVLHLHGRRPFILKYLLPGQDLDSLISIIHDEDLQLMIQEYDRVITSSSPLKPSRLRLFLFFCDQPETAIPIHAHDAKQETRFVDAINDSRILSRLVLDASAADRSEKPGGPPPNEYDHNLEALFVTQNNKQIKSLADVADTSPSGSLSSSPSTFSLTSPGVDDSGSRLKQQQCQMEDLFAQLNFATTDDMMKQDDGCAVSSASLAPPVMVTGHNMNGVTCDALASELTPSPLQHVRARASEALSLLSPNSVTSENRIASSCSHLSQPVHLQEQANMRSEISDANPAIQRDKVEESGYRSATQVNQNQEMEQFVQCVQQVAIPCYYPVYAILPVVATHPTGASSGKPLLTVTPQIGTASTVYNNATPIVNAASNPAFLQPAQFHQHYYVDFPQFHYCPLQSNIAFAPSPHGFEHQSTAKYVANSVLFESTRPRDSRKGISTGDATAIALLSES 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2088 527 SMART PB1_new 43 135 IPR000270 GO:0005515
Alju13g2088 527 Gene3D - 48 136 - -
Alju13g2088 527 CDD PB1_UP2 32 135 - -
Alju13g2088 527 MobiDBLite consensus disorder prediction 213 241 - -
Alju13g2088 527 Pfam PB1 domain 44 135 IPR000270 GO:0005515
Alju13g2088 527 SUPERFAMILY CAD & PB1 domains 45 139 - -
Alju13g2088 527 MobiDBLite consensus disorder prediction 1 23 - -
Alju13g2088 527 PANTHER OS05G0427100 PROTEIN-RELATED 19 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2088 Alju-ChrAlju13 37914468 37917175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2088 16 178 MAP Kinase Kinase Kinase AT1G79570 33.728 3.30e-22 99.4