Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2060 ATGTGGATGGTGGGACATAACGATGGTGGTGAGTTTGCCATGGTTGATCACTCATTCAATGGAAGAAATCTCAGGCCTCTCATTCCGAGGCCAGTGACTTCTTCCAGTAATACCTCAACTACAACTCCTCCTTGCCTGAGAAGTATTCACGGCTCCAATTTATTTACACAATATCACGATCTGACATCATCAACGACGGATCAGAGTAAGAAAGAGTTCAATAGTTCACCAGTTGTGGTGAGCTCAAGGTGGAATCCAACTCCAGAGCAGCTAAGAGCCCTTGAAGAGTTGTATCGGCGAGGAACAAGAACACCATCTGCTGAGGAAATTCAACATATCACTTCACAGCTGCGTGTATTTGGTAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCATAAAGCCAGAGAGAGGCAGAAACGACGCCGTCAGACTGAATCGGCTCCCCGTGATTTTGATAGTCTAGAGAAGGAAGGCATAGGCGTAGGTAAGACAGTGTTTGAAGTTGAACAGACCAATAACTGGGCACCCTCTACAAACTGCAGTACACTTGCAGAGGAATCTGTCTCATTACCAACAAAAGCAGTGGTGGCAGAGCGAAGGACGGACGGATGGATCCAATTCGATGAAGAGGAATTACAGCAGAGAAGGAACTTGATGGAAAGGGATGCCACGTGGCGGACGATGCAGCTACCTTGTCCTCTTCTTCATCCTGCAGATGCCACCCACCTCATTAGCACATGTACAGCTAGGTTAATTGCCTCCACAAGCATGGCAACAGCGAGAGAAATTGACCCAAAGCCCATTAAGGCACATGATCTCAGCTTCTTTATATCGCCTCACAGTGAAAGCACGGTCATCAGTGACGACCAAGTTGAACCTCAAACCCTAGAACTATTCCCTCTTAGGAGTGGGGAAGGCAGTGATAACGTCAACCCTAAAGAGAGTGAGATTTCAGTTTCTGCACTGAATGACAATAACTTGATCCCAAGCCAGTTCTTTGAGTTCCTTCCATTGAAAAACTAG 1032 0.4593 MWMVGHNDGGEFAMVDHSFNGRNLRPLIPRPVTSSSNTSTTTPPCLRSIHGSNLFTQYHDLTSSTTDQSKKEFNSSPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEEIQHITSQLRVFGKIEGKNVFYWFQNHKARERQKRRRQTESAPRDFDSLEKEGIGVGKTVFEVEQTNNWAPSTNCSTLAEESVSLPTKAVVAERRTDGWIQFDEEELQQRRNLMERDATWRTMQLPCPLLHPADATHLISTCTARLIASTSMATAREIDPKPIKAHDLSFFISPHSESTVISDDQVEPQTLELFPLRSGEGSDNVNPKESEISVSALNDNNLIPSQFFEFLPLKN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2060 343 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 67 338 IPR044555 GO:0003700|GO:0099402
Alju13g2060 343 FunFam WUSCHEL-related homeobox 4 81 148 - -
Alju13g2060 343 MobiDBLite consensus disorder prediction 29 48 - -
Alju13g2060 343 MobiDBLite consensus disorder prediction 26 48 - -
Alju13g2060 343 MobiDBLite consensus disorder prediction 63 82 - -
Alju13g2060 343 CDD homeodomain 83 143 IPR001356 GO:0003677
Alju13g2060 343 ProSiteProfiles 'Homeobox' domain profile. 87 142 IPR001356 GO:0003677
Alju13g2060 343 SUPERFAMILY Homeodomain-like 82 147 IPR009057 -
Alju13g2060 343 Pfam Homeodomain 82 141 IPR001356 GO:0003677
Alju13g2060 343 Gene3D - 79 142 - -
Alju13g2060 343 SMART HOX_1 79 146 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2060 Alju-ChrAlju13 37710391 37712364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2060 1 343 Wox Gene Family AT3G18010 36.896 5.47e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Alju13g2060 Homeodomain 1e-19 CL0123