Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2055 ATGGGCCTTCTCAGGGTTCGGATCAAGCGCGGAGTGAACCTCGCCGTTCGTGATGTTCGTAGCAGCGATCCTTACGTCGTCGTAAAGATGGGCACACAGAAGCTCAAGACTCGGGTGATAAAGAAATGCGTGAATCCAGAGTGGAACGAAGACCTGACGCTTGCAGTGACGGAGGCAGATCATCCTATAAAATTGACGGTGTATGACCATGACACGTTTAGCAACGATGACAAGATGGGGGAAGCAGAGTTTGAGATAAGGCCGTTTGTAGAATCGGCGAATATGAGGCTGGAAGGGTTGCCGAGTGGGACGGTGGTGAGAAGAGTGCATCCAGACAGGCAAAACTGTTTGGCGGATGAGAGTTGCATTACGTACAGAGAAGGCAGGATTGTGCAGGATTTGGTGCTCAGATTGCGCAACGTTGAATGTGGTGAGCTTGAAGTCCAATTGGAATGGATCCGACTTCCTTCTACCTCCGATTCTATGTAG 489 0.5031 MGLLRVRIKRGVNLAVRDVRSSDPYVVVKMGTQKLKTRVIKKCVNPEWNEDLTLAVTEADHPIKLTVYDHDTFSNDDKMGEAEFEIRPFVESANMRLEGLPSGTVVRRVHPDRQNCLADESCITYREGRIVQDLVLRLRNVECGELEVQLEWIRLPSTSDSM 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2055 162 Pfam C2 domain 2 93 IPR000008 -
Alju13g2055 162 CDD C2_ArfGAP 2 144 - -
Alju13g2055 162 SMART C2_3c 3 98 IPR000008 -
Alju13g2055 162 ProSiteProfiles C2 domain profile. 1 99 IPR000008 -
Alju13g2055 162 Gene3D C2 domain 1 161 IPR035892 -
Alju13g2055 162 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 122 IPR035892 -
Alju13g2055 162 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 157 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2055 Alju-ChrAlju13 37660942 37661837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2055 34 157 C2H2 Transcription Factor Family AT1G70790 53.968 1.06e-47 150