Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2045 ATGGGTAACGGCGACCTCAATCTCAACCAAGAAGATGCCAAGAGCTACGCTCTCAGCGGCAAGATTATGCTTAGCGCCATCGTCATTTTATTCTTCATCGTCATCCTAATGATTTGCCTCCACCTATATGTTCGCTGCTTTCATGTACGAGCACGTCGCCGCCAACGCCGCCGTCATCGCTCTCACCTTGTTTTTTACGACGACTCTGCCGCCGCTCCTGTCGTGGCCTCAACGCGCGGTCTTGATTCATCTCTACTCATGTCTCTCCCCGTCTTTGTCTACTCTTCCAAGACCCACACCGAGCAGGTTGAATGCCCAGTATGCTTGTCCGAGTTCGAAGAGGGCGAAACGGGTCGAGTTTTGCCCAAATGCAATCACAGTTTTCACGCTGACTGCATCGACATGTGGTTTAAGACCCACTCCACATGCCCCACTTGCAGGGCTGCTGTTGAACCCGCACCGGCAGACACCCATCGGCCTGAAGTGGTGATTACTGTGAGTGATGAACCGGAAATTCCTGAACCGGGGTCCACTTCTGGGCTGTGCTCGGAGTGTCAGCACGAAGGGAGGGATGAAATTCGAAGTGGCCACACGGTTTGTTCTTCGTCGTCTTCGATTGAGTTAGGGCGGAAGCCATCGTCACTGGTGGGCGTGACCTTGGAGGTGCCCAAGAGGAGCGAGAGCTTTGGAGCCGAGTCGCCGTCGACTCAATCGCCTTTCAGGTCGCCGATGAGTCGCATGCTGTCGTTCAAGAGGATGCTTAGCAGAGACCGGAAAGCAAACCTTTCACCATCGGCGGGTGGCAGCGGATCTGGCTGTGAGATAGAGAAGGATGGAGGAGGAGGAGGAGGAGAGGAGACGCAATGA 867 0.5479 MGNGDLNLNQEDAKSYALSGKIMLSAIVILFFIVILMICLHLYVRCFHVRARRRQRRRHRSHLVFYDDSAAAPVVASTRGLDSSLLMSLPVFVYSSKTHTEQVECPVCLSEFEEGETGRVLPKCNHSFHADCIDMWFKTHSTCPTCRAAVEPAPADTHRPEVVITVSDEPEIPEPGSTSGLCSECQHEGRDEIRSGHTVCSSSSSIELGRKPSSLVGVTLEVPKRSESFGAESPSTQSPFRSPMSRMLSFKRMLSRDRKANLSPSAGGSGSGCEIEKDGGGGGGEETQ 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2045 288 CDD RING-H2_EL5-like 104 147 - -
Alju13g2045 288 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Alju13g2045 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 153 IPR013083 -
Alju13g2045 288 MobiDBLite consensus disorder prediction 226 245 - -
Alju13g2045 288 Pfam Ring finger domain 104 147 IPR001841 -
Alju13g2045 288 SUPERFAMILY RING/U-box 86 154 - -
Alju13g2045 288 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 13 167 IPR044675 -
Alju13g2045 288 MobiDBLite consensus disorder prediction 229 244 - -
Alju13g2045 288 MobiDBLite consensus disorder prediction 254 288 - -
Alju13g2045 288 SMART ring_2 105 146 IPR001841 -
Alju13g2045 288 FunFam RING-H2 finger protein ATL3 72 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2045 Alju-ChrAlju13 37584264 37585130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2045 9 268 Rapid Response to Elicitors AT3G16720 50.360 5.21e-74 227