Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2030 ATGTCTTCTCCTTCATGGCTCACAAGCTTCTCTTGTTCCCCTCCCCCCATAGAATCATCTTCACCAGCCTTCTTCTTCCTATCTCCATGTCCTCAGAGAGTTTTGTTTTCCTCTGTTGATCTCTTCTTCTTGCTGATTCTTTTAGTCTTCTCCCTTCGGAAACTCTGTTCTAGACCCTGTTCTTATGCCAACACCACCTCATCCATAGATAGACCCATTTTGTTTGAAAAGAACTCACACTACAAAGTTACTTGCTTTTTCCATTCTTCTTTATTTGTAGTCATTCTGTCGGCAATAGCTTACGTGGTTTTAAGCATCTTAACCTTCACTCACGACGCCTCTCTTCAGACTTCATGGAAACTCATCGAAGGTCTGTTTCGGGGTTCTCAAGCAATAACCAATATAGTGGTTGTGCTTGTGATGTTGAACGAGAAGAGGGTTAAAGATACTAAACATCCCTTGCCACTCAGAATCTACTGGGCAGCAAATTTGGTTATTTCTTGCTCATTCTCTGCTTCGGGCATTTATCGTTTAGTAAACATTGGTGCAGCCAACTTGGAGTTTAATTTGAAGATTGACGATATATTCTCGATTGTAAATCTTCCTATGGCTGTTTTTCTATCACTAGTAGCTGTTAAAGGGTCATCGGGGATTCATGTAATCAAAAGATCAGATTTTGATTCGAGTTCCGCAGAACCATTACTGAGCCAGAGGCTTTTAAAGGAAGAGAATTTGAGTCCTTACGCTAATGCTTCCCTGTTGTCCAAAATGATGTTTCTGTGGATGAACCCTCTGCTCCAAAAAGGCAACAAATTTCCCCTTAAACTTGATGATGTGCCTTCACTTCCTCCTCAGTTTCGAACTGAAAAAATGACAGAGCTCTTTGCCAGGAATTGGCCGAAGCCAGAGGAAAATTGCAAATATCCAGTAGGAATCACACTATTCCGATGCTTCTGGAAAGACTTTATTTTCACTGGCATTCTGGCAGCCATTAAACTTTTGGTTTCGTTAGTGGGGCCAGTGCTTGTTCAAAAATTTGTTGATTACACCTCTGTGAAAGAAAGGCCAGCCTCACAAGGATTTGTTTTGGTACTGATCCTGCTTCTGGCAAAATCAGTTGAATCCCTCAGTAGCCACCTGTTCGGTTTTCACAATCAGAAACTGGGTATGCTAGTTCGTTCCAGCCTCATGACTTCTTTATACGAAAAGCTCATGAGATTGACAAGCTCGGCGAGGCAGACTCATGGGGCTGGACAGATTGTGAATTACATGGCTGTGGATGCTCAGCAGTTACATGACATGACGTTGCAGCTGCATAATATTTGGATGACGCCTTTACAAGTTGTAGCTGCTATGGTTTTGATGTACTTCTATGTCGGCTTATCGGCATTCGCGGCCTTGCTTGGGGCCATTGCAATGTTTGTGTACGCATTACTGGGTTCAAAAAAGAACAACATGTTCCAGTACAGTATAATGGTGAATCGTGATCTGAGGATGAAGGCCATGACTGATATGCTTAATAACATGCGTGTCATTAAGTTCCAAGCATGGGAGAAGCATTTCGGCAGCAAGATACAGAATTTTCGTGAGTTGGAGTATCATTGGATTGGCAAGTTCATGTATGCTTTTTCTAACACCCTTGGGATTTTCTCGACTTCTCCTATTATGATAGCAATTCTTACCTTTGGAGCAGCAATTCTTCAGGGATATCATCTTGATTCCGGCACTGTGTTTACAGTAATATCAATGATCAAAATACTGCAAGAACCAGTTAGGTCGTTCCCTCAGTCTCTTCTTTCCATCTCACAAGCAACAATATCCCTTAAGAGGTTGGATGAGTACATTAAAAGTAGGGAATTGGATGAAAGTTCGGTGGAGAGAGTTGAAGACAGTGAAAGTAATCTAGCTGTGGAAATAAAAGAAGGGTCTTTCTCATGGGATGATAAAGGAGAGGAGGCGACTCTGCAAGTTTCAGAGCTGGAAATAAGTAAGGGCGATCTTGCTGCAGTTGTTGGAACTGTTGGATCTGGCAAGTCTTCACTATTGGCTTCTGTGTTAGGGGAAATGCACAAGATCTCAGGACAGGTGAGAGTATGTGGGAAAACAGCATATGTAGCACAGACAGCATGGATAAGGAATGCGACGATAGAAGAGAACATATTGTTTGGATTGCCGATGAATAGGGAGAAATACAGGGAAGCCATAAGAGTATGTTGCCTGGAAAAGGATCTTGAGATGTTAGAGCATGGAGACCAGACAGAGATAGGAGAAAGGGGCATAAACCTCAGTGGTGGCCAGAAGCAACGCGTGCAACTTGCTAGAGCTGTGTATCAGGACTGTGACATCTATCTCCTCGACGATATCTTTAGTGCTGTTGATGCCCAAACTGGAACCTCTATCTTTAAGGAATGTGTTATGGGGGCTCTCAAGGACAAGACCGTTATCCTTGTAACCCACCAAGTTGACTTCTTGCATAATTTCAGCCTTATAGCGGTCATGCGAGACGGGAAGATCGTGCAACGGGGAAAGTACAAAGAACTTATGGAATCTGGCTTGGATTTTAAAGCACTTGTAGCTGCTCACGAAGCCTCAATGGAGCTTGTAGACAGGACTGATGCTTCTGGTCCATCTACAAAACCTTCAAAAGAAGCGGAAAACAAAGGGAAAATGAACTCTCAAGAGGAAGACAGGTCTGAATCTGGCAAGGGAACTTCAAAGCTGATAGAAGATGAGGAGAGAGAAACCGGCCGAGTCAACTTCCAAGTATATATACAATATTGCACAGAAGCGTATGGATGGTGGGGAGTAGCACTAGTCCTGATAATGTCTCTAGTGTGGATTGCAACTATGATGTCTGCAGACTACTGGCTGGCATTTGAAACTTCAAAAGATCGCACCTTTAATCCCTCTCTGTTCATAGGTGGCTATGCTGCAATTGGGGTTGTTTCATGCATAATGGTAATAATCAGATCATACGCAGTAACACGTTGGGGTCTAGAGACAGCTCAGAGCTTCTTCAATAGAATGCTTCAAAGTATTCTCCACGCACCAATGTCATTCTTTGATACCACTCCTTCTGGCAGAATTCTTAGTCGTATGTCTACTGATCAACTCTTCGTCGATATAATAATTCCAATGTTCATGGGCATGGTGGTGCTCTCGTACTTCTTCTTACTCAGCATCTTCTTTGTCACTTGCCAAAATGCTTGGGAGGTTGTCTTCCTCATTGTTCCATTGATTTGGCTCAACAACTGGTACCGGAAATATTACCTAGAATCTTCTCGGGAATTGTCTCGGCTTGAATCTATTGCAAAAGCTCCTGTGATTCATCAATTTTCAGAGACCATTTCTGGTGTCATGACAATCCGTGGCTTCGGGAAACAAAGCACATTTTCTGAAGAAAATATAAATAGGGTGAATACAAACTTGAAGATGGAATTCTGCACCTATGGATCGTTTGAATGGCTCGCTTACCGATTAGACATGTTTGGAGTAGTTTTCCTTTGCATTGCCACAGTGCTTATGATCTATTTGCCGAGTGCTATCATGAAGCCAGAATATGTTGGTTTGTCTCTATCCTATGGCCTATCTCTGAGTGGTCTCATGGCATTGGCCGTAAGTTTGACTTGCCAAGTTGAGAACAAAATGATTTCAGTTGAGAGAATAAAGCAGTTCTCCAATATTCCACCAGAAGCTCCATGGACAATCCCTGATGGCCTTCCACCCCACAATTGGCCCTCTCATGGCCATATCAAGCTACAGGATTTGAAGGTTCGGTATCGGCCAAATACACCACTAGTTCTGAAGGGAATCTCTCTAAGCATTGATGGAGGAGAGAAGATTGGGATAGTAGGGCGTACTGGGAGTGGGAAATCAACACTAGTGCAGGTGTTATTTAGGTTGGTGGAGCCTTCATCTGGGAAAATAGTGATTGATGGCATCAACATTTGCACCCTGGGACTTCATGATCTCAGGTCTCGCTTTGGTATTATTCCACAAGAGCCTGTTCTCTTTGAAGGAACTATAAGAAGCAACATAGACCCTAATGGACTGCATTCCGACGAAGAAATTTGGAAGAGCCTCGAGCGGTGCCAACTGAAGGATGTGGTGGCTGCAAAGCCCAAGAAACTGGATTCTTCAGTGGTGGATGGGGGAGATAATTGGAGTGTGGGGCAGAGGCAGCTGTTATGTTTGGGAAGGGTAATGCTGAAACGCAGCCAAATACTGTTCTTGGATGAGGCAACAGCCTCAGTTGATTCCCAAACTGATGTTGTCGTACAGAAGATCATCCGGGAAGACTTCAAAAACTGTACCATTCTCAGTGTTGCTCACAGAATACCCACTGTTATGGATTGTGATAAGGTTCTAGTTGTAGATGCGGGATATGCAAAGGAATTTGATACGCCGGAGAGATTGCTGGAAAGGCCCTCACTTTTTGGCGCATTGGTCCAGGAGTACTCTAACAGATCATCTTAA 4476 0.4334 MSSPSWLTSFSCSPPPIESSSPAFFFLSPCPQRVLFSSVDLFFLLILLVFSLRKLCSRPCSYANTTSSIDRPILFEKNSHYKVTCFFHSSLFVVILSAIAYVVLSILTFTHDASLQTSWKLIEGLFRGSQAITNIVVVLVMLNEKRVKDTKHPLPLRIYWAANLVISCSFSASGIYRLVNIGAANLEFNLKIDDIFSIVNLPMAVFLSLVAVKGSSGIHVIKRSDFDSSSAEPLLSQRLLKEENLSPYANASLLSKMMFLWMNPLLQKGNKFPLKLDDVPSLPPQFRTEKMTELFARNWPKPEENCKYPVGITLFRCFWKDFIFTGILAAIKLLVSLVGPVLVQKFVDYTSVKERPASQGFVLVLILLLAKSVESLSSHLFGFHNQKLGMLVRSSLMTSLYEKLMRLTSSARQTHGAGQIVNYMAVDAQQLHDMTLQLHNIWMTPLQVVAAMVLMYFYVGLSAFAALLGAIAMFVYALLGSKKNNMFQYSIMVNRDLRMKAMTDMLNNMRVIKFQAWEKHFGSKIQNFRELEYHWIGKFMYAFSNTLGIFSTSPIMIAILTFGAAILQGYHLDSGTVFTVISMIKILQEPVRSFPQSLLSISQATISLKRLDEYIKSRELDESSVERVEDSESNLAVEIKEGSFSWDDKGEEATLQVSELEISKGDLAAVVGTVGSGKSSLLASVLGEMHKISGQVRVCGKTAYVAQTAWIRNATIEENILFGLPMNREKYREAIRVCCLEKDLEMLEHGDQTEIGERGINLSGGQKQRVQLARAVYQDCDIYLLDDIFSAVDAQTGTSIFKECVMGALKDKTVILVTHQVDFLHNFSLIAVMRDGKIVQRGKYKELMESGLDFKALVAAHEASMELVDRTDASGPSTKPSKEAENKGKMNSQEEDRSESGKGTSKLIEDEERETGRVNFQVYIQYCTEAYGWWGVALVLIMSLVWIATMMSADYWLAFETSKDRTFNPSLFIGGYAAIGVVSCIMVIIRSYAVTRWGLETAQSFFNRMLQSILHAPMSFFDTTPSGRILSRMSTDQLFVDIIIPMFMGMVVLSYFFLLSIFFVTCQNAWEVVFLIVPLIWLNNWYRKYYLESSRELSRLESIAKAPVIHQFSETISGVMTIRGFGKQSTFSEENINRVNTNLKMEFCTYGSFEWLAYRLDMFGVVFLCIATVLMIYLPSAIMKPEYVGLSLSYGLSLSGLMALAVSLTCQVENKMISVERIKQFSNIPPEAPWTIPDGLPPHNWPSHGHIKLQDLKVRYRPNTPLVLKGISLSIDGGEKIGIVGRTGSGKSTLVQVLFRLVEPSSGKIVIDGINICTLGLHDLRSRFGIIPQEPVLFEGTIRSNIDPNGLHSDEEIWKSLERCQLKDVVAAKPKKLDSSVVDGGDNWSVGQRQLLCLGRVMLKRSQILFLDEATASVDSQTDVVVQKIIREDFKNCTILSVAHRIPTVMDCDKVLVVDAGYAKEFDTPERLLERPSLFGALVQEYSNRSS 1491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2030 1491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 634 858 IPR027417 -
Alju13g2030 1491 Gene3D ABC transporter type 1, transmembrane domain 900 1232 IPR036640 GO:0005524|GO:0016020
Alju13g2030 1491 Gene3D ABC transporter type 1, transmembrane domain 311 619 IPR036640 GO:0005524|GO:0016020
Alju13g2030 1491 CDD ABCC_MRP_domain2 1249 1469 - -
Alju13g2030 1491 CDD ABC_6TM_ABCC_D1 324 611 IPR044746 GO:0140359
Alju13g2030 1491 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 323 603 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju13g2030 1491 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1251 1485 IPR003439 GO:0005524
Alju13g2030 1491 MobiDBLite consensus disorder prediction 868 908 - -
Alju13g2030 1491 Gene3D - 1238 1483 IPR027417 -
Alju13g2030 1491 Pfam ABC transporter 658 787 IPR003439 GO:0005524
Alju13g2030 1491 CDD ABC_6TM_ABCC_D2 936 1226 IPR044726 GO:0140359
Alju13g2030 1491 Gene3D - 635 867 IPR027417 -
Alju13g2030 1491 Pfam ABC transporter transmembrane region 323 591 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju13g2030 1491 Pfam ABC transporter transmembrane region 943 1176 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju13g2030 1491 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 637 860 IPR003439 GO:0005524
Alju13g2030 1491 CDD ABCC_MRP_domain1 637 837 - -
Alju13g2030 1491 SMART AAA_5 1277 1461 IPR003593 GO:0016887
Alju13g2030 1491 SMART AAA_5 664 845 IPR003593 GO:0016887
Alju13g2030 1491 FunFam ABC transporter C family member 5 899 1232 - -
Alju13g2030 1491 MobiDBLite consensus disorder prediction 882 908 - -
Alju13g2030 1491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1243 1484 IPR027417 -
Alju13g2030 1491 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524|GO:0016887
Alju13g2030 1491 SUPERFAMILY ABC transporter transmembrane region 933 1237 IPR036640 GO:0005524|GO:0016020
Alju13g2030 1491 SUPERFAMILY ABC transporter transmembrane region 314 619 IPR036640 GO:0005524|GO:0016020
Alju13g2030 1491 FunFam ABC transporter C family member 10 307 619 - -
Alju13g2030 1491 Pfam ABC transporter 1268 1416 IPR003439 GO:0005524
Alju13g2030 1491 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 249 1487 - -
Alju13g2030 1491 FunFam ABC transporter C family member 3 1234 1485 - -
Alju13g2030 1491 FunFam ABC transporter C family member 5 622 869 - -
Alju13g2030 1491 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 933 1214 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2030 Alju-ChrAlju13 37469751 37476730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2030 622 881 Calmodulin-binding Proteins AT2G36910 30.714 4.97e-26 115