Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2028 ATGAAACCACAATACCCTAAACCTCGATCCTATGCACCACAAATGGAGATGGCGATTCCCCCCTCCCAGCTTTCCGACAACGATCGGAGCAGCTCCGAATTGCGAGCTCTCGATTGCAACCTCACTTCGCTTTGCGACCATATCCAGATGGAAGGCTTCAATTCCGGCTCATTCTCCGACATCGTGCTCCATGCAATGGGTTCCACTTATCACCTCCATCGCCTTATCCTTTCTCGGAGTTCTTACTTCAGAAATATGCTTCATGGTCCCTGGAAAGAAGCCAGTGCTCCTATTGTCACCCTGCATGTTGATGATAAGAATGTTAATAATGAGGCAATCACAATGGCTTTGGCTTATCTCTACGGGCACCACCCTAAGCTTAGTGATAGCAATGCATTTCGTGTTCTTGCTGCAGCATCCTTTCTTGACCTCCAGGACTTATGTGCATTATGTACAGACTTCATTATATCTGAGCTGTGGACTTCAAATTTCTTGGCTTATCAGGTTTTTGCAGAAAACCAAGACTATGGCATTCATGGGGAGCGTGTAAGAAATGCTTGTTGGGGCTACCTCTGTCAAAGTGGTGGCATGGAGTTGAAGGAGGTGCTTCCGAAACTTTCTTCTCAAACTCTACATGCATTACTGACCTCTGATGAACTGTGGATACCAAGTGAAGAGAAACGGTTTGAATTGGCACTGCACACGTTCCTGGCAAAAAATGCTCACTGGAAAGCTGAGCATCCTGAGCAAGGGAGTTCTGGTTCTGAGTCTGCAACTAGTACTCATTCTGATTCTGATAATATCAAGGGAAAAAGTGGAGCTGACAGCAGCACAAGTAATAGGTTGGGAACTGCTATAGAGCATCTGAATTTTAAAAGTGATGTAAAGGACATCATTGATCATAATCTGCGAGTTGAGCTTGCAAACAGTGTGGAACGCTTCAACAATGATGATTCTGATTCTAATCAACTGGCACAAGCAACATCATTTGCTGGTTCATCAAGTTTGGAACCTAGATATGCTTGCAACACGGAAGGGCCTTCGTCAATCAGTAATTTGGTGTCAGAAAAAGATGGGATCAGAACATCATGTTGTTATGTTGAGATGCCTCCCAGTGCCGGCGCAACTGGAGTGGCTATTGAAGGGCCATCTGAGGAAGGGTCAAATTCTTCCTGCAATGGCCTCACATCCAGTGACTGGGGAAGATACAATGTGCCTCTTTTTCCATGGGGCAGCCGGGTAGTTGGCGGAAGACGGCTTAAAGCTCACTCCAAAGGAAAGTATGGAATTCATGGGGATGAACATGAAGCATTTGTAAATATATTTGAAGGAGGTTCTCTTTTATATTGCAATATGTCTTTTGAGGCGCTTCTGAATGTCAGAAAGCAACTTGAAGAATTAGGTTTCCCTTGCAAAGCTGTAAATGATGGCCTTTGGCTGCAGATGCTTCTTAGTCAGAGGGTGCAAGAAATTGCTGCTGATACATGCAAAACTTGTTGCCTTGTGAGTGCAGCATGCACTTGCCGGCAGCCATTTGCATTTTCTCAGGGAGTTTCCACTCCTAGTTACTACATGCAAGAACATAACCTGAGTAATAACTCCGGGAACACAGGAAACATATATGTTGCTGAGTCTTCTCAAAGTGAAGGAAGTGGCATATTTAGACCTGTACGAGTACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGTAGAGGAACTACATTTGTGCCAACATCTGCTTCACCTCCTACACGTTTTGTCTTCTCTCGTGTGCCATTTGGTGTTGGCAACAGAAACTACCCACAATCTGCAGCTAATGATGACTCAGAGACACAAGCTGACCACAACGGAGACATGTCTGGAGATGGGTTGACAGCTTTGGTTGGGCTAAGCCAGGGAGGGAGTAGTGGAGCCAATGCACATGGAGAAATGGCACAAAGGGGATATGAGACTGGCATGAGAAGCAAGATCTCTGGAATTGCTGCTGGAGGCCCAAGTACTGGTGGCATTCCCATGCAATTGTTAGAGGCACCAGAACATACCATAGGAATAGAATGGGAGAATACTAGTAGTTCTTCCATATCGTTGGATTTGAAAACACCTTTAACCCATTTTCCTCCATTTCGTTTTGGAGTGCAATTTGAGGATGTGCACAGGCTTGGTGATGGTCAGGTGAAGCATTCTCCAGAAGTGTTCTATGCTGGTTCTCTGTGGAAGGTCAGTGTACAGGCTTTTAATGATGAAGACCCCCAGGGACGGAGAACTCTCGGGCTGTTTCTTCACCGTCGGAAAGCAGAGTTTGCTGATTTACATAGAAAGGTGCACGTGTATGTAGATTCTCGCGAAAAGGTGACTGCTCGCTATCAGTTGATATGCCCATCAAAAAGGGAAGTGATGGTGTTCGGAAGCTTTAAACAAACGGGCACTCTTCTACCTAAAGCTCCTAAAGGATGGGGTTGGCGAACTGCTCTGCTGTTTGACGAGCTTGCGGATCTTCTGCAGAACGGGGCCCTTCGAATAATTGCCGTGGTGCAGCTCGTTTAG 2550 0.4576 MKPQYPKPRSYAPQMEMAIPPSQLSDNDRSSSELRALDCNLTSLCDHIQMEGFNSGSFSDIVLHAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPIVTLHVDDKNVNNEAITMALAYLYGHHPKLSDSNAFRVLAAASFLDLQDLCALCTDFIISELWTSNFLAYQVFAENQDYGIHGERVRNACWGYLCQSGGMELKEVLPKLSSQTLHALLTSDELWIPSEEKRFELALHTFLAKNAHWKAEHPEQGSSGSESATSTHSDSDNIKGKSGADSSTSNRLGTAIEHLNFKSDVKDIIDHNLRVELANSVERFNNDDSDSNQLAQATSFAGSSSLEPRYACNTEGPSSISNLVSEKDGIRTSCCYVEMPPSAGATGVAIEGPSEEGSNSSCNGLTSSDWGRYNVPLFPWGSRVVGGRRLKAHSKGKYGIHGDEHEAFVNIFEGGSLLYCNMSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKTCCLVSAACTCRQPFAFSQGVSTPSYYMQEHNLSNNSGNTGNIYVAESSQSEGSGIFRPVRVHVRGAIDGLAGIGRGTTFVPTSASPPTRFVFSRVPFGVGNRNYPQSAANDDSETQADHNGDMSGDGLTALVGLSQGGSSGANAHGEMAQRGYETGMRSKISGIAAGGPSTGGIPMQLLEAPEHTIGIEWENTSSSSISLDLKTPLTHFPPFRFGVQFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEFADLHRKVHVYVDSREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRIIAVVQLV 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2028 849 ProSiteProfiles BTB domain profile. 59 129 IPR000210 GO:0005515
Alju13g2028 849 MobiDBLite consensus disorder prediction 1 31 - -
Alju13g2028 849 MobiDBLite consensus disorder prediction 250 280 - -
Alju13g2028 849 Gene3D Potassium Channel Kv1.1; Chain A 25 192 IPR011333 -
Alju13g2028 849 MobiDBLite consensus disorder prediction 244 280 - -
Alju13g2028 849 SMART BTB_4 59 159 IPR000210 GO:0005515
Alju13g2028 849 SUPERFAMILY POZ domain 53 157 IPR011333 -
Alju13g2028 849 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 13 849 - -
Alju13g2028 849 Pfam BTB/POZ domain 53 157 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Alju13g2028 BTB 8.5e-15 CL0033