Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2022 ATGCCACGGAAGGAATGGTGTAATTACGATTGGCGCCACTCTACTTGGAATGCCACTTGGCTGTGCTTGGAGCGAGCTAAGGAAAGAACGTCAGTTCTTAAAAGCTTCAAAGCTTACTGTCTGTCGCCGGCACGCTCTTTTCTTCGCCTCCTCTGGTTCCTAGCTCTTGAGCGAAGAAATTTTTTATACCCTTCAAAAAAAAATATGCAGAACGAGGAGGGACAGATCACTGAACTCTACATTCCAAGGAAATGCTCCGCAACAAATAGACTGATAACTGCAAAGGACCATGCGTCCGTGCAGATTAACATTGGGCATCTGGATGAGACCGGTGCCTACAATGGTCAGTTCTCCACATTTGCCATGTGTGGGTTCATACGTGCCCAGGGGGATGCTGATAGTGCATTAGATCGTCTGTGGCAGAAGAAGAAAGCCGAAGTGAAGCAACAGTAG 453 0.4746 MPRKEWCNYDWRHSTWNATWLCLERAKERTSVLKSFKAYCLSPARSFLRLLWFLALERRNFLYPSKKNMQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDETGAYNGQFSTFAMCGFIRAQGDADSALDRLWQKKKAEVKQQ 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2022 150 Pfam Ribosomal protein S21e 69 144 IPR001931 GO:0003735|GO:0005840|GO:0006412
Alju13g2022 150 Gene3D - 65 149 IPR038579 -
Alju13g2022 150 PANTHER 40S RIBOSOMAL PROTEIN S21 69 149 IPR001931 GO:0003735|GO:0005840|GO:0006412
Alju13g2022 150 ProSitePatterns Ribosomal protein S21e signature. 79 87 IPR018279 GO:0003735|GO:0005840|GO:0006412
Alju13g2022 150 FunFam 40S ribosomal protein S21 69 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2022 Alju-ChrAlju13 37434889 37438643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2022 69 149 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 82.716 1.22e-49 152