Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2020 ATGGATTTGGGTTCGACTAAGCTCGACTATTACGATGACATGTGGAGGGTCCAATCTTCTGCTACACTTCTTTCCCACTTCAAGGGAGATGATGGAAGAAATGCTTTGATATTAGATCGCAGTATCTTCTATCCGCAAGGTGGTGGTCAGCCAGCCGACACTGGCTTCATACGCATTTCTGGTTCAGACTGCAATTTTGTGGTTCAAGACGTGCGATCAAAAGGTGGAATTGTTTTCCACTATGGAATATTTGAGAATTTGGGTCAGGAAGTTGAACACCAAGTTGAGACGGGAAGAGAGGTCACACTTGTTGTTGATGATATCAGGCGAAAGCTGAATTCCAGGTTGCATTCAGCTGGCCATTTACTTGATATTTGTCTGCCCAGAATAGGATTGGGTCATTTAGAGCCTGGCAAAGCTTACCATTTTCCTGATGGGCCTTGGGTAGAATATAAAGGAACAATTCCACAAAATGAAATGCAGAACAAGCAAAAAGATTTGGAGCAAGAAGCTAATGGGCTAATTTCTGTGGGAGGAAAAGTTTATGTTGCTATATTAACATATGATGAAGCTGCTGTGCTTTGTGGTGGTTGCCTTCCCGATTATGTTCCCAAGGGAAGTACACCTCGCATTGTGAGGGTAGGAGATACTCCTGGCTGTCCCTGTGGTGGTACCCATGTTTCTGATATTTCAGATATCGGGTGCATTAAGGTTTCTCAAATTCGGTCAAAGAAGGGATCAACAAAAGTCTATTACAACTGTGTATGTTGCTGCATTCTGATTTCGTCGTCTCTCTTGGCTTCGTGCGCTTTGTTGAGGATCTGCTGGTACAGTCTCATGATAGGGATCACTCTCTCTGAAGCTTTGTTTCTGACTTCTGAGAGGGAGAAAGTGTGGCAAAGAAGTCCATTGAGGAAATCAAGCATGCTTAGTCCTGAAGGAGAACTTAAAATTAGTTTTGGCTATCAATGCAATAGCCAAAGAAGTATACCTTGTGAGGTTTCCAAAGGCTATAACATTCTACCCGAAGTTCACAGAACAAGTAGTTTCTCCTGCTTGTCTGGTGCAGCCTTGAGTGCAAATGCTACGTTAGCCAACACAAACATCTGCAATGGTTTGCTAGGAGAAGAAATACTTCCAACTTGGGACTCACCCAATTCATTCCGTAAGGTACCCTCTTCTCCAAGTCTTTCAAGGTTGGATATATTATCATCTTCTCTCCACAGTAATTTGTCAAACTTAAGTTGCAGTCCATCCACTCCAAGCGATATGCTTGAATATGACTCTTGTACATTAAAATGCATGAGTGCTCCTTCCAAGAGTGAAGGTTTTCTTAATGCCATGGAAGTCCAAGCTGCAGGCGGAGCTGCTGGCGAAGATAGAGTTCAAGCTGTTTGTTCTGAAGAAAATGGTTGGCTTTTTTGTGCAGTTTATGACGGCTTTAATGGAAGAGATGCTGCCGACTTTCTGGCCGGTACTCTATATGACACCATTATATCTAACTTTAATACATTGTATTGGGAATTTGAGCCAGATTCCAATAAAGCTTCTAATGATGTGGGTCTGGGTGGATCCTATAAGTTGGATGATAGTCTCATGGTTCATGAGGAGCAATCTCTGTCAAAACTTGAGGGAAACAATAATTCTTATCTTGGCTGTTTGGCAAAGAGTAACCTATCTGCGAAGGTAGGAGCGCCATATAAATCATTTTCAGATGGGGTACTTGATAGCCTTGAACGCTCTCTTAGTCAGGTGGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGGCCTGATTTAGTTTCTGTTGGATCTTGTGTTTTACTAGTGCTTCTTCATGGGAATGACTTGTACACACTTAATTTAGGTGACAGCAAAGCTGTATTGGCAACATGTAACACAAGAGGCAAACTTCAAGCTATCCAGCTCACAGAAAGCCATACCGTTGAAAATGATGTTGAAAGAGCTCGACTTCTGGCTGATCACCCAGATGATCCTAAAGCTATTATAGGAGGAAAAGTGAAAGGAAAACTGAAGGTTACTCGTGCTTTAGGAGTAGGTTACTTGAAAAAGAAATGTCTGAATGATGCGCTGATGGGAATCCTTCGAGTCCGAGATCTTATAAGCCCTCCATATGTTTCCTCTCAACCATCACTGAATGTGCATAAGATCTCAAACTCTGATCAATTTGTGATAGTAGGAAGTGATGGCTTATTTGACTTCTTCAGTAATGATGAGGCTGTGGAGCTTGTTGAGTCTTATATCTTAACCAATCCATTTGGTGATCCAGCTAAGTTCCTCATCGAGCAGCTTGTAGCAAGAGCAGCCAATTCCGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCGGCGGGGAGAAGGAGGAGGTATCATGATGACGTGACCGTGATTGTGATCATTCTTGGGATGAATCATCGGACTTCAAAGGCATCAACTTGCATTTAA 2475 0.4251 MDLGSTKLDYYDDMWRVQSSATLLSHFKGDDGRNALILDRSIFYPQGGGQPADTGFIRISGSDCNFVVQDVRSKGGIVFHYGIFENLGQEVEHQVETGREVTLVVDDIRRKLNSRLHSAGHLLDICLPRIGLGHLEPGKAYHFPDGPWVEYKGTIPQNEMQNKQKDLEQEANGLISVGGKVYVAILTYDEAAVLCGGCLPDYVPKGSTPRIVRVGDTPGCPCGGTHVSDISDIGCIKVSQIRSKKGSTKVYYNCVCCCILISSSLLASCALLRICWYSLMIGITLSEALFLTSEREKVWQRSPLRKSSMLSPEGELKISFGYQCNSQRSIPCEVSKGYNILPEVHRTSSFSCLSGAALSANATLANTNICNGLLGEEILPTWDSPNSFRKVPSSPSLSRLDILSSSLHSNLSNLSCSPSTPSDMLEYDSCTLKCMSAPSKSEGFLNAMEVQAAGGAAGEDRVQAVCSEENGWLFCAVYDGFNGRDAADFLAGTLYDTIISNFNTLYWEFEPDSNKASNDVGLGGSYKLDDSLMVHEEQSLSKLEGNNNSYLGCLAKSNLSAKVGAPYKSFSDGVLDSLERSLSQVENDFLYMVEQEMEERPDLVSVGSCVLLVLLHGNDLYTLNLGDSKAVLATCNTRGKLQAIQLTESHTVENDVERARLLADHPDDPKAIIGGKVKGKLKVTRALGVGYLKKKCLNDALMGILRVRDLISPPYVSSQPSLNVHKISNSDQFVIVGSDGLFDFFSNDEAVELVESYILTNPFGDPAKFLIEQLVARAANSAGFSMEELMNVPAGRRRRYHDDVTVIVIILGMNHRTSKASTCI 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2020 824 ProSiteProfiles Alanyl-transfer RNA synthetases family profile. 1 238 IPR018165 GO:0003676|GO:0004813|GO:0005524|GO:0006419
Alju13g2020 824 CDD PP2Cc 457 811 IPR001932 -
Alju13g2020 824 FunFam Threonyl and alanyl tRNA synthetase second additional domain-containing protein 1 103 - -
Alju13g2020 824 PANTHER ALANYL-TRNA EDITING PROTEIN 5 254 - -
Alju13g2020 824 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 210 243 IPR012947 GO:0004812|GO:0005524|GO:0043039
Alju13g2020 824 SMART PP2C_4 435 809 IPR001932 -
Alju13g2020 824 SUPERFAMILY Translation proteins 4 87 IPR009000 -
Alju13g2020 824 Gene3D - 1 103 - -
Alju13g2020 824 Pfam Protein phosphatase 2C 588 766 IPR001932 -
Alju13g2020 824 Gene3D - 106 258 - -
Alju13g2020 824 FunFam Similar to alanyl-tRNA synthetase 106 255 - -
Alju13g2020 824 SUPERFAMILY ThrRS/AlaRS common domain 107 252 IPR018163 GO:0000166
Alju13g2020 824 SMART tRNA_SAD_4 209 251 IPR012947 GO:0004812|GO:0005524|GO:0043039
Alju13g2020 824 SUPERFAMILY PP2C-like 457 811 IPR036457 -
Alju13g2020 824 ProSiteProfiles PPM-type phosphatase domain profile. 444 811 IPR001932 -
Alju13g2020 824 Pfam tRNA synthetases class II (A) 33 106 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
Alju13g2020 824 Gene3D - 415 820 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2020 Alju-ChrAlju13 37424782 37433070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2020 312 824 PP2C-type Phosphatase Gene Family AT3G16560 63.391 0.0 602