Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2005 ATGTTGGGCGACGAGGGTAGGGAGTGTTCCGCCGGTGGCGGCGGCGGTCGGAGAACATATTCACGTTCTGTTTCTTGGACTGATCGGTCTCCGACCAACATTAGCCAAAACCGCCGGCCGCCGACAAATAGTAAGCCCCGGCCATTGTTGCCTCCTCTCCAGCCTCTCTCCATCATGAAACGGACGGCTGAGGAGTGGCCAAGCGCGGGATCTGACGATCTTGGAATTTGGCCTCTTCCTCAAACCCCAAGAGGGTCCGTCAAAGCCCTGGAGAGTTCTGATTCGGGTCAACCCGCAAAAGAATTTCAGTTCAAGAGGGACAAGTTAGCGTTTTTTGACAAAGAGTGTTCCAGAATCGCGGAGCATATATATCTAGGGAGTGATACAGTGGCAAAAAATCACGAGCTTTTGAGGCATAACGGGATTACCCATGTGCTCAACTGTGTCGGGTTTGTTTGTCCTGAGTATTTCAAAAGCGATTTTGTGTATAAGACACTCTGGTTGCAAGATAGCCCCACCGAGGACATCACCAGTATCCTCTACGATGTTTTTGATTACTTTGAGGATGTCCGAGAGCAAGGCGGGCGTGTGCTTGTGCATTGTTGCCAGGGAGTTTCTCGATCAAGCTCTCTGGTAATTGCATATCTCATGTGGAGAGAAGGTCAGAGCTTTGAAGATGCGTTTCAGTATGTGAAGACTGCACGAGGAGTGACCAATCCAAATATGGGTTTTGCTTGTCAACTTCTTCAGTGTCAGAAGCGTGTACTTGCTATGCCCGCAAGTCCAAATTCCATTCGTAGGATGTATCGAATGGCCCCTCACTCACCTTACGACCCTCTTCATTTAGTCCCCAAAATGGTAAACCATCCAGGTGCTCGAGCTCTTGATTCTCGTGGAGCGTTCATTATTCATGTTCCTTCTGCTATATATGTTTGGAGTGGAAAAAGTTGCAGTCCGGCGATGTCATGTAATGCAAGGGCTGCAGCATGTCAGGTCATACGTTATGAGAAGGCAAAGGGTCCAATTCAGAGTATCAAAGAAGGTGAAGAACCTCTGGAGTTTTGGATTGCTCTTGCTAATGAGCAAATCTTATCAGGCCATGAAAGCGTGGAGGTTCATGAAGCTGGTAATAGTATGGAGATTGATGACAGAAAGGTTAGTGAGTATGATTTGGATTTTGAAATATTCCAAAAGGCACTTGCTGGTGGGGTTGTTCCACCTTTCTCTGTTTCTAGTGCTGGATCAGAAACTTGCTTACCTGCTAGAGAAAATGGTTGGAGTAGACTGAGGAGGAATTTTGCTCGTGGTATGATGAAAGAATGGCTCGCATCATCCTGTAAATGGAACTGTGAAGTTATTACTACCAAATCCGAAGACGAGTGCTGTGTGATTATGCAAGAAGGAAAACAAGATTCTCTAGTTGATCCTAATTTGTCACCAGCATCACCAACCTATCCCTGTGGTTCCCCTGATTCTTTTGAATGTTTTCCAGATAACCGATCAGACATGGCAAAGGGTAGCTCTATTGAAGTCATGGAGGATTTCTCTGCTCCTCCCACTTCAGATTCTTTTTCTTGTTTTCTAAGCAACAGCCCAAAGTTCAATTTCAAGTCCCCAACACTCTCACCCTCCAGTTCTGATTATGCCAGTTCTTTTACATTTTCACCTTCATCTACAAATTGGTCTGACTTGTCGCATGTGTCTTCTAGGCAGCCATCACCATCTAGCATCGAACCAACTGATCCTTTTTATGCCAAAGATATTTCTTTCTCAGAGAACTCCGTACTTCTCAAAGCTGTTTCGTCGCCTAAAGAGGAGCCATTTTGTGCTAACCACACAATGGGAGGGGTAAACACCTATTTGCAGGGTGAAGGATCTTCCCCTTCCCTTGCAGAGCGCAGAGGGAGTAATCCTCCGCCTCGTATGTTCCTTCCCTCTATCAACGAATCATCTCACAGCCACACCAACCTGGTAAGATCACAGTCATTCTCTTTGCCTGACTTAGAGGGTAATGTAATGGAGGATGTTAGTTTGAAGCAATCTGATCAAGAAAACAATGGAAAAGGGCAAGAGCCAATGGAACATGCTGATATTAGTTCAGGTGGTGAATCGCAGAGTGAAAATAATGACAGTGATCAGAATATGCGACTATGTTATGTGATATAG 2166 0.4571 MLGDEGRECSAGGGGGRRTYSRSVSWTDRSPTNISQNRRPPTNSKPRPLLPPLQPLSIMKRTAEEWPSAGSDDLGIWPLPQTPRGSVKALESSDSGQPAKEFQFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHELLRHNGITHVLNCVGFVCPEYFKSDFVYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSSSLVIAYLMWREGQSFEDAFQYVKTARGVTNPNMGFACQLLQCQKRVLAMPASPNSIRRMYRMAPHSPYDPLHLVPKMVNHPGARALDSRGAFIIHVPSAIYVWSGKSCSPAMSCNARAAACQVIRYEKAKGPIQSIKEGEEPLEFWIALANEQILSGHESVEVHEAGNSMEIDDRKVSEYDLDFEIFQKALAGGVVPPFSVSSAGSETCLPARENGWSRLRRNFARGMMKEWLASSCKWNCEVITTKSEDECCVIMQEGKQDSLVDPNLSPASPTYPCGSPDSFECFPDNRSDMAKGSSIEVMEDFSAPPTSDSFSCFLSNSPKFNFKSPTLSPSSSDYASSFTFSPSSTNWSDLSHVSSRQPSPSSIEPTDPFYAKDISFSENSVLLKAVSSPKEEPFCANHTMGGVNTYLQGEGSSPSLAERRGSNPPPRMFLPSINESSHSHTNLVRSQSFSLPDLEGNVMEDVSLKQSDQENNGKGQEPMEHADISSGGESQSENNDSDQNMRLCYVI 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2005 721 MobiDBLite consensus disorder prediction 558 578 - -
Alju13g2005 721 ProSitePatterns Tyrosine specific protein phosphatases active site. 199 209 IPR016130 GO:0016311|GO:0016791
Alju13g2005 721 MobiDBLite consensus disorder prediction 619 716 - -
Alju13g2005 721 Gene3D Severin 268 364 IPR029006 -
Alju13g2005 721 MobiDBLite consensus disorder prediction 20 43 - -
Alju13g2005 721 SUPERFAMILY Actin depolymerizing proteins 261 360 - -
Alju13g2005 721 CDD DSP 116 250 - -
Alju13g2005 721 MobiDBLite consensus disorder prediction 619 633 - -
Alju13g2005 721 MobiDBLite consensus disorder prediction 643 667 - -
Alju13g2005 721 Pfam Dual specificity phosphatase, catalytic domain 123 253 IPR000340 GO:0008138|GO:0016311
Alju13g2005 721 SMART dsp_5 115 254 IPR020422 GO:0006470|GO:0008138
Alju13g2005 721 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 107 257 IPR029021 -
Alju13g2005 721 MobiDBLite consensus disorder prediction 699 715 - -
Alju13g2005 721 Gene3D Protein tyrosine phosphatase superfamily 89 256 IPR029021 -
Alju13g2005 721 MobiDBLite consensus disorder prediction 558 580 - -
Alju13g2005 721 ProSiteProfiles Dual specificity protein phosphatase domain profile. 115 257 IPR020422 GO:0006470|GO:0008138
Alju13g2005 721 PANTHER MKPA PROTEIN 14 662 - -
Alju13g2005 721 MobiDBLite consensus disorder prediction 1 60 - -
Alju13g2005 721 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 174 235 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2005 Alju-ChrAlju13 37319568 37321733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2005 6 151 Protein tyrosine phosphatase (PTP) family AT3G55270 42.077 2.87e-31 129