Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g2001 ATGCCTACCCGTTCTTCACTTTCACTTGATACCCACGGTTCTTCCTCTTTGAAGAGGAAGAGGCCTCTCAATATTCAGATACCAGACGTCTTGCAAGAAATCCAGACACCCAAGCTTAATGATTCCAAGGCATTGAAGGACAACGTATCTCTTAGCGGGATTGGTTTTGGGGTTTTTTCTGTTAAAGGCAAGAAACTGTGCATGGAAGATGCTCACAAGATTGTTTCTTCTTTAGAGAGCGACCCAAAAAAAGGCTTCTTTGGCGTCTACGATGGGCATGGCGGCCGGAAGGCTGCAGAGTTTGTCGTTGAGAACTTGCACGCCAATATTCTCGAAATGGTTGAGAATCGTGAAGAATCAAGGACCAAGGAGGAGGCAGTTAAAGCTGGGTATCTAAAGACCGAAGAAGAGTTCTTGAAAAAGGGTGTAGGAAGCGGTGCCTGTTGTGTGACAGCCCTGATTCAAGGGGAAGAGATTGTTGTTTCAAACGTGGGAGATTGCAGGGCTGTTCTTTGCAGAGGTGGAGTGGCTGAAGCTCTCACTAGAGATCACACAGCTGAACTAGAGGATGAACGGAAAAGAATTGAGGAAAAGGGAGGATATGTGGAGATACATCGAGGAGCTTGGAGAGTTCATGGGGTGCTCTCTGTTTCTAGAAGCATTGGGGATGCTCATCTGAAGGAATGGGTGGTGGCTGAACCTGATACCAAGATCTTACAATTAACTGCAGACATGGAGTTTCTTGTGTTGGGGTCTGATGGACTGTGGGATAAGGTCGGTAACCAAGAAGCTGTTGACGCTGTGACCCGTGTTGGTCAAAATGAGGAGAAGCTAGGCTCCGATGTACGAAATGATATTGATGATGATGATTATGTTCAAGTTAATGTAAGTCCGTCATCGAAGCTACGAAGAGTTTCGCTTGTGAAGCAGCCTAGGGGCCATAAAAAGGCACAGAATGGCTGGAATGAAGTTGGTGAAGATGAATTTGGTTGTGAAAATGAAAGCCCTCCATCAAAATCAAGAAGAGTTTCATTGGTGAAGCGAGTGAGCATGAAGAAAGAGATGCTGGTAAAAGAAAGCAACATGTGCAAGAAAAGTGAAGGCTCTGGACTTCTGGCGGCTTGTAAGGAGCTTGTGAACCTTGCTGTGAAAAGGGGGACTTTGGATGATGTCACTATAATGATAATCGATTTAAAACACTACAAGTGCAACATCTGA 1218 0.4524 MPTRSSLSLDTHGSSSLKRKRPLNIQIPDVLQEIQTPKLNDSKALKDNVSLSGIGFGVFSVKGKKLCMEDAHKIVSSLESDPKKGFFGVYDGHGGRKAAEFVVENLHANILEMVENREESRTKEEAVKAGYLKTEEEFLKKGVGSGACCVTALIQGEEIVVSNVGDCRAVLCRGGVAEALTRDHTAELEDERKRIEEKGGYVEIHRGAWRVHGVLSVSRSIGDAHLKEWVVAEPDTKILQLTADMEFLVLGSDGLWDKVGNQEAVDAVTRVGQNEEKLGSDVRNDIDDDDYVQVNVSPSSKLRRVSLVKQPRGHKKAQNGWNEVGEDEFGCENESPPSKSRRVSLVKRVSMKKEMLVKESNMCKKSEGSGLLAACKELVNLAVKRGTLDDVTIMIIDLKHYKCNI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g2001 405 CDD PP2Cc 54 270 IPR001932 -
Alju13g2001 405 PANTHER PROTEIN PHOSPHATASE 2C 43 397 IPR015655 GO:0004722|GO:0006470
Alju13g2001 405 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Alju13g2001 405 ProSiteProfiles PPM-type phosphatase domain profile. 55 398 IPR001932 -
Alju13g2001 405 SMART PP2C_4 41 396 IPR001932 -
Alju13g2001 405 Pfam Protein phosphatase 2C 55 273 IPR001932 -
Alju13g2001 405 Gene3D - 50 403 IPR036457 -
Alju13g2001 405 SUPERFAMILY PP2C-like 48 400 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g2001 Alju-ChrAlju13 37293468 37295762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g2001 2 402 PP2C-type Phosphatase Gene Family AT1G67820 52.567 1.29e-134 390