Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1971 ATGATCGATGGGGCTGGGGAAACAGAAGAAGTGGTGGATTATAAATACGATACAAAACTGCATCTTAAGGTCGGATGTGAAGCAGGCAGCTCATCATTTTCTTGGGATGGTTTGTGTTTGAAGAAAGAGAGGGAACAAGGGACACAAAAGAAGAAAGGTGAGAATAAGGTCAATAGTAAAAAAATGGGAAGATCACCAAGCTGTGATGACATTGGTTTGAAGAAAGGTCCTTGGACTCCTGAAGAAGATCAGAAGCTTGTTAATTTCATTCAAGAGCATGGTCATGGGAGCTGGAGAGCTCTTCCAAAATTAGCAGGGCTGAACAGATGTGGGAAAAGTTGCAGGCTACGATGGACGAATTACTTGAGGCCTGACATAAAGAGAGGGAAGTTTTCTCAAGAAGAACAACAAACAATTCTGAATCTCCATGCTATCCTGGGAAACAAATGGTCGGCGATTGCAAGCCAATTACCGGGACGGACAGATAATGAGATCAAGAATTTCTGGAACACCCATCTAAAGAAGAAGCTGATCCAAATGGGTTATGATCCGATGACACACCAACCTCGAACTGATATTTTCTCAAGTTTGCCTCATCTCGTAGCACTGGCTAGTCTCAAAGAACTCTTGGACCATAATCAACCATGGCAACAGAGTGCTGCTTTGAGATTACAAGAAGAGGCCGTTCAATTGGCCAGACTTCAAGGCTTACAACATCTCTTGCACCCTCAGCCTCAACCTTCTGCAACTGAAGCTTGTGACTTTACGAACTTGGATACCATTAATATGAATCCTCTAGAGTCCCTGAATCTGACAAACAATAACATAAATAATCCACCTTCAATTGGAGTCAACAATCTCCAATTGGGCTATGACTCGTTATTCTCTAACATGCCAGAGTTGAAATCGCCACGTAACAATCATCAACCACCGTCGTCGTTAAGTCAGGTAGACAGTTCTTTCAATTCACCGTGGCTTCTTTCATGCTCAAGCAGTATTCTATCTCCTTCCACTGTGCCAGAGATTTCAATGACAAATACTCTTAATTATGGAGAGGTGGGCCCTTCCATGTGGCCTGACCTTCTGCTGGAGGACCCTTTGTTCCATGAGATTTAA 1116 0.431 MIDGAGETEEVVDYKYDTKLHLKVGCEAGSSSFSWDGLCLKKEREQGTQKKKGENKVNSKKMGRSPSCDDIGLKKGPWTPEEDQKLVNFIQEHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEQQTILNLHAILGNKWSAIASQLPGRTDNEIKNFWNTHLKKKLIQMGYDPMTHQPRTDIFSSLPHLVALASLKELLDHNQPWQQSAALRLQEEAVQLARLQGLQHLLHPQPQPSATEACDFTNLDTINMNPLESLNLTNNNINNPPSIGVNNLQLGYDSLFSNMPELKSPRNNHQPPSSLSQVDSSFNSPWLLSCSSSILSPSTVPEISMTNTLNYGEVGPSMWPDLLLEDPLFHEI 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1971 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 122 IPR017930 -
Alju13g1971 371 Gene3D - 130 177 - -
Alju13g1971 371 ProSiteProfiles Myb-like domain profile. 123 173 IPR001005 -
Alju13g1971 371 CDD SANT 130 173 IPR001005 -
Alju13g1971 371 Gene3D - 72 128 - -
Alju13g1971 371 MobiDBLite consensus disorder prediction 44 59 - -
Alju13g1971 371 SUPERFAMILY Homeodomain-like 72 169 IPR009057 -
Alju13g1971 371 Pfam Myb-like DNA-binding domain 75 122 IPR001005 -
Alju13g1971 371 Pfam Myb-like DNA-binding domain 128 173 IPR001005 -
Alju13g1971 371 ProSiteProfiles Myb-like domain profile. 70 122 IPR001005 -
Alju13g1971 371 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 62 299 - -
Alju13g1971 371 FunFam MYB-related transcription factor 74 127 - -
Alju13g1971 371 FunFam Transcription factor MYB39 130 191 - -
Alju13g1971 371 SMART sant 74 124 IPR001005 -
Alju13g1971 371 SMART sant 127 175 IPR001005 -
Alju13g1971 371 MobiDBLite consensus disorder prediction 44 75 - -
Alju13g1971 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 177 IPR017930 -
Alju13g1971 371 CDD SANT 77 122 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1971 Alju-ChrAlju13 37072538 37074043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1971 62 371 MYB Transcription Factor Family AT5G10280 51.014 1.63e-102 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju13g1971 Myb_DNA-binding 8.7e-17 CL0123