Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1956 ATGATACGCTTCCTTTTCTGATCAAATGCAGGAAGTGAGGTGCTACTGATCATGACGCAGCAGAATGTGATGGTTCCCGATGCAAATCCTGGTCTCAACATGGCTATTTCTGCCTCCGTTTCCAATTCCTCCATTTTCTCCGCCCCCGCCCACAAACCGCCCGCCGTGCCCTCCGCCTATATTCCCATTCCCAGGCGAAAGGTGCTCAAGAACCTTGAAATCAATGCTTGGGTTGACTCCATGAGAGCCTCTTCTCCCACCCACCCCAAATCCACTCCTTCTCTCGCCGAAGAACATAACTCTTGGATTCTTCACCACCCCTCTGCATTAGACATGTTTGAGCAAATCATCGATGCCTCCAAAGGCAAGCAGATTGTCATGTTTCTGGATTACGACGGCACGCTCTCGCCCATCGTCAACGACCCTGACCGTGCTTTCATGTCCGATCAAATGAGAAAAACAGTAAGAAAACTGGCGATGTCTTTTCCCACTGCCATAGTAACCGGCAGATGCAGAGACAAGGTATACAGCTTTGTTCGCCTGGCAGAGCTATATTATGCGGGAAGCCATGGCATGGATATCAAAGGCCCAACAAGAAGCTCCAAATACAATAAAGGAAGCAAAGCAGAGGCGATTCTTTTTCAGCCTGCCAGTGAGTTTCTTCCCATGATAGATGAGGTGTACCGAGTGTTAGTTGAGAAAACCAAATCAACACCAGGAGCGATGGTGGAGAACAACAAGTTCTGCGTCTCTGTTCATTATCGTTGTGTTGATGAGAAGAAATGGAGTGAACTAGCTCACCAAGTGAAATCGGTGATTAAGGAGTACCCGAAGCTTCGTCTCACCCAAGGAAGGAAGGTGTTTGAGATTCGTCCCACTATTAAATGGGACAAAGGGAAAGCCCTAGAATTTCTACTAGAGTCACTTGGATTTGCCAATTGTGCTGATGTCTTCCCTGTCTACATTGGTGATGATCGAACCGACGAAGATGCCTTTAAGAAATTGAGAGACAGAGGACAAGGTTTGGGCATTCTTGTGTCAAAGTTTCCAAGGGAGACATGTGCATCTTACTCTTTGCAGGAACCGGAGGAGGTGAAGGACTTTCTTCAGCGGTTGGTGAAGTGGAAACAAGCATCTCAGCGTACATGCTCCAAATAA 1158 0.475 MIRFLFXSNAGSEVLLIMTQQNVMVPDANPGLNMAISASVSNSSIFSAPAHKPPAVPSAYIPIPRRKVLKNLEINAWVDSMRASSPTHPKSTPSLAEEHNSWILHHPSALDMFEQIIDASKGKQIVMFLDYDGTLSPIVNDPDRAFMSDQMRKTVRKLAMSFPTAIVTGRCRDKVYSFVRLAELYYAGSHGMDIKGPTRSSKYNKGSKAEAILFQPASEFLPMIDEVYRVLVEKTKSTPGAMVENNKFCVSVHYRCVDEKKWSELAHQVKSVIKEYPKLRLTQGRKVFEIRPTIKWDKGKALEFLLESLGFANCADVFPVYIGDDRTDEDAFKKLRDRGQGLGILVSKFPRETCASYSLQEPEEVKDFLQRLVKWKQASQRTCSK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1956 385 NCBIfam trehalose-phosphatase 123 374 IPR003337 GO:0003824|GO:0005992
Alju13g1956 385 FunFam Trehalose 6-phosphate phosphatase 217 293 - -
Alju13g1956 385 FunFam Trehalose 6-phosphate phosphatase 223 382 - -
Alju13g1956 385 CDD HAD_TPP 126 365 - -
Alju13g1956 385 Gene3D - 125 228 IPR023214 -
Alju13g1956 385 Gene3D - 229 385 IPR023214 -
Alju13g1956 385 FunFam Trehalose 6-phosphate phosphatase 125 212 - -
Alju13g1956 385 SUPERFAMILY HAD-like 126 375 IPR036412 -
Alju13g1956 385 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 51 382 IPR044651 GO:0004805|GO:0005992
Alju13g1956 385 Pfam Trehalose-phosphatase 128 362 IPR003337 GO:0003824|GO:0005992
Alju13g1956 385 NCBIfam HAD-IIB family hydrolase 127 338 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1956 Alju-ChrAlju13 36970870 36974025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1956 114 384 Trehalose Biosynthesis Gene Families AT1G60140 26.990 2.17e-09 57.4