Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1955 ATGATGGCAACTATAGGTATGTATGATAATAGCAGCAGCCTGGCATCAGATTTCATAGATCCGTATGGTGAAGATCTGACGAAGGCACTTGAACCTTTTGTGAAAATGGATTCACCGACGTCGTCTCTATCTTCTCTCTCTCTTCCATCATCACCTTCCTGCTCTTATACTTCACCCACTTCTATGTCCAGTTATTATCCCAACCTCCGTACAGCATCGAGCTCCCTCATATTTTCTCCTGGGTTCTCGAGTAGCATAGGGCTTAACCAACTCACCCCATCTCAAATTCTTCAGATTCAGGCTCAATTCCTGGTCCGACAGCAACAATCCCTGGATTTCCTCGGTCCTAAACCTGTCCCCATGAAACATGTCCGTAATGCTCCGAAACCCATGAAACTATACCGAGGAGTGAGGCAGAGGCATTGGGGGAAGTGGGTGGCTGAGATCAGACTCCCAAAGAATCGGACCCGTCTCTGGCTCGGCACTTTTGACACCGCCGAAGAGGCTGCTTTGGCTTATGACAACGCTGCTTATAAGCTGAGGGGTGATTTTGCTCGCCTTAATTTCCCTCACCTGCGACACCAAGGAGCTCATGTGTTTGGTGAATTTGGGAATTACAAGCCTCTTCATTCCTCCGTCGATGCCAAGCTTCAAGCTATTTGTGAAAGTTTGGCCAGTTCCCAGAAAGAGGGGAGTGCAGGGGAAACCTGCTCCGTCGGCGATTCAAAGCCTGAGGTGGCGCTGGAAGAGTCAGAATCGAAGAGTGATGTGGAGGATTGTAAGGTGGAGAACACAGCATCGTCGCCTTTGTCTGATGAATCCTGGGCTGGGTCGTCTTCCCCTGAATCCGACATCACTTTCTTGAATTTCTCTGATTCCAAGGATGATGAGAACATCGAGTTTGGGCTGGAGAAGTTTCCTTCCGTGGAGATTGATTGGTCTGCTATTTGA 951 0.4879 MMATIGMYDNSSSLASDFIDPYGEDLTKALEPFVKMDSPTSSLSSLSLPSSPSCSYTSPTSMSSYYPNLRTASSSLIFSPGFSSSIGLNQLTPSQILQIQAQFLVRQQQSLDFLGPKPVPMKHVRNAPKPMKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAYKLRGDFARLNFPHLRHQGAHVFGEFGNYKPLHSSVDAKLQAICESLASSQKEGSAGETCSVGDSKPEVALEESESKSDVEDCKVENTASSPLSDESWAGSSSPESDITFLNFSDSKDDENIEFGLEKFPSVEIDWSAI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1955 316 Gene3D AP2/ERF domain 133 191 IPR036955 GO:0003700|GO:0006355
Alju13g1955 316 SMART rav1_2 133 196 IPR001471 GO:0003700|GO:0006355
Alju13g1955 316 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 2 316 - -
Alju13g1955 316 MobiDBLite consensus disorder prediction 262 288 - -
Alju13g1955 316 Pfam AP2 domain 134 182 IPR001471 GO:0003700|GO:0006355
Alju13g1955 316 MobiDBLite consensus disorder prediction 231 291 - -
Alju13g1955 316 FunFam Ethylene-responsive transcription factor 2 132 191 - -
Alju13g1955 316 PRINTS Ethylene responsive element binding protein signature 156 172 IPR001471 GO:0003700|GO:0006355
Alju13g1955 316 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Alju13g1955 316 ProSiteProfiles AP2/ERF domain profile. 133 190 IPR001471 GO:0003700|GO:0006355
Alju13g1955 316 MobiDBLite consensus disorder prediction 245 261 - -
Alju13g1955 316 SUPERFAMILY DNA-binding domain 133 191 IPR016177 GO:0003677
Alju13g1955 316 CDD AP2 132 192 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1955 Alju-ChrAlju13 36948530 36949480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1955 2 316 AP2-EREBP Transcription Factor Family AT4G39780 51.104 2.33e-84 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju13g1955 AP2 7.7e-15 CL0081