Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1935 ATGAATTCAACATCCACACAGTTTGTTTCCTCAAGAAGGATGGGTTTATATGATCCTATCCACCAGATTAGCATGTGGGAAGAAAACTTCAAAAGTAATTGTAATTTAAGTGCTTCTGTGCCCTTAATTGGTGAGGCAGATGTCAAGTTAGATAATCAGTCAGAGGATTCTTCCCATGGAATGCTCGGAATTCCAAAGAATTATGACCAAGAAGCTAATAAGTCTATTGAAAAGATACAAAGACGTCTTGCACAAAATCGAGAGGCTGCTCGCAAGAGTCGTCTGCGGAAAAAGGCTTATGTTCAGCAATTAGAATCAAGCCGTTTGAAGCTGATCAAGTTAGAGCAAGAGCTGGACCGTGCAAGACAGCAGGGATCCTTTATAGGTTGTGGACTTGATTCTGATAATTTGGTATTTGCTGGATCTGTAAATTCAGGCATAGAAAGCTTTGAGATGGAGTATGGGCAGTGGGTAGAAAAACAAAACAGACAAATTTGTGAGCTGAGAAGTGCTTTAAATGCTCATATCAGTGACATAGAGCTCAGAATACTTGTAGATGGTATAATGAATCACTATTCTGACCTTTTCCGCATGAAATCAGCAGCTGCAAAAGTGGATGTTTTCTATGTCTTGTTTGGTATGTGGAAAACAACAGCTGAACGGTTTTTCTTGTGGATTGGAGGATTCCGTCCATCCGAGCTTCTCAAGGTTCTTGTCCCTTTGATTGAACCTCTGACAGAACAACAACGAATGGATGTTTATAACCTTGGACAATCATGCCAGCAGGCAGAAGATGCCCTTTCACAAGGCAGGGACAGACTTCAGCAAATACTTGTTGAAACCATTGCTGCCGGACAACTGGTCGACGGAACTTACATTCCTCAGATGACTATTGCAGTGGAGAAGTTGGAAGCTTTGGTGAGCTTTGTGAATCAGGCTGATCATCTTCGGCAAGAAACATTGCAACAAATGTTTAGAATCCTTACAATTCGTCAGGCAGCTCGGTGCTTGCTTGCCTTGGGGGAATACTTCCAACGTTTGAGGGCTTTGAGCTCCCTTTGGGCTAATCGTCCTTCTGAACCACCTGCTTAA 1092 0.424 MNSTSTQFVSSRRMGLYDPIHQISMWEENFKSNCNLSASVPLIGEADVKLDNQSEDSSHGMLGIPKNYDQEANKSIEKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLIKLEQELDRARQQGSFIGCGLDSDNLVFAGSVNSGIESFEMEYGQWVEKQNRQICELRSALNAHISDIELRILVDGIMNHYSDLFRMKSAAAKVDVFYVLFGMWKTTAERFFLWIGGFRPSELLKVLVPLIEPLTEQQRMDVYNLGQSCQQAEDALSQGRDRLQQILVETIAAGQLVDGTYIPQMTIAVEKLEALVSFVNQADHLRQETLQQMFRILTIRQAARCLLALGEYFQRLRALSSLWANRPSEPPA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1935 363 FunFam BZIP family transcription factor 77 126 - -
Alju13g1935 363 ProSiteProfiles DOG1 domain profile. 147 357 IPR025422 GO:0006351|GO:0043565
Alju13g1935 363 SUPERFAMILY Leucine zipper domain 78 118 IPR046347 GO:0003700|GO:0006355
Alju13g1935 363 SMART brlzneu 74 145 IPR004827 GO:0003700|GO:0006355
Alju13g1935 363 Pfam bZIP transcription factor 78 108 IPR004827 GO:0003700|GO:0006355
Alju13g1935 363 Pfam Seed dormancy control 164 239 IPR025422 GO:0006351|GO:0043565
Alju13g1935 363 PANTHER TRANSCRIPTION FACTOR TGA9 1 360 - -
Alju13g1935 363 Coils Coil 97 124 - -
Alju13g1935 363 Gene3D - 76 126 - -
Alju13g1935 363 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Alju13g1935 363 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 118 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1935 Alju-ChrAlju13 36797362 36799599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1935 1 361 Calmodulin-binding Proteins AT5G10030 69.146 0.0 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju13g1935 DOG1 5.4e-31 No_clan