Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1914 ATGGACTACTATTTTGGAAACCCTAATTACTCACAATTCTCTGCAGCAAATCCATCCTCATCTGATCAGTTCATTTCGGATTTTTTGGTGCTTGATAATGGTGTTGGGCACCAACAATCCTGCTGGTCACACAGTACAGAATCATCGGAGAAGGCAACTAGCGATGCCAGCGGATTTAGTGCTGCTACTAATGATGCTACCTCGTCCGAGAATAACAATATGCAAGTGCTTGTTCTCTCTTCTTTCTTAAAATGCAAAAACGAGATCAAACGAAACAAGGAAGAGACGATGGGGCGAAGGATCGCGTTTAGGACCAGATCGGAGGTTGAGGTTATGGATGATGGGTACAAATGGAGGAAGTACGGAAAGAAGTCAGTGAAGAACAGTCCGAATCCAAGGAATTACTACAAGTGTTCGTATGGAGGATGCAGTGTGAAGAAGAGGGTGGAAAGGGACAGGAATGATTCAAGTTACGTGATAACAAGTTATGAAGGAGTTCACAACCATGAGGTCCCAAGTTATCGCTCTTCCTTCTTCCATCCTAATCCTCGGCCCTTTCACTCTTTAACTAACTCATCATCTTCCTAGAAAAAAAAAATAGTCGAAAGAAAAAGGTCGACCACATCCCTTCATGGAAAGACGCTGCTGGACCGAACATCGCATCTTATTTTGCATCCTGTTTATCTGTCTTGCCTGATTCAAGAAACGGGATTTGATAACAATCTTCGGCAACCCATCAGCTATATCCCATCTTTTTGGGGATCTTGGGGATCATTGTTTACTTTAACTTCATCTATAACTTCGAGCACCATCAACTTCTCGAGCTTGATTATTCAGTTTCACTGTCAACTTCATTTCTGA 861 0.4239 MDYYFGNPNYSQFSAANPSSSDQFISDFLVLDNGVGHQQSCWSHSTESSEKATSDASGFSAATNDATSSENNNMQVLVLSSFLKCKNEIKRNKEETMGRRIAFRTRSEVEVMDDGYKWRKYGKKSVKNSPNPRNYYKCSYGGCSVKKRVERDRNDSSYVITSYEGVHNHEVPSYRSSFFHPNPRPFHSLTNSSSSXKKKIVERKRSTTSLHGKTLLDRTSHLILHPVYLSCLIQETGFDNNLRQPISYIPSFWGSWGSLFTLTSSITSSTINFSSLIIQFHCQLHF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1914 286 SUPERFAMILY WRKY DNA-binding domain 104 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju13g1914 286 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 46 194 IPR044810 GO:0003700
Alju13g1914 286 FunFam WRKY transcription factor 57 98 172 - -
Alju13g1914 286 Pfam WRKY DNA -binding domain 113 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju13g1914 286 Gene3D WRKY domain 97 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju13g1914 286 SMART WRKY_cls 112 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju13g1914 286 ProSiteProfiles WRKY domain profile. 107 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1914 Alju-ChrAlju13 36667577 36671018 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1914 8 170 WRKY Transcription Factor Family AT5G64810 45.930 2.66e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju13g1914 WRKY 1.5e-22 CL0274