Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1908 ATGCTACACTACTGTAATTCTGTGGTAGAAAGTGAGCTAAGCAACTTGGCGATCAGCTTTCAGTGGGAAGATAAATATACCCTTGTTACCTTGTTTACTCGGACTTTTGACTCCCCTGGCCCCCCATCATCCTCTTCCTCACTCTCTCTTTCCAATCTTCATCACTCAAATCGCTTTCTCCTTATACAGTGTTTACCAGAGCTTCTGCTCTCTCCCTCTAATGGCAGACCTCATACCGTAAGGAAAAAAAAGCCACCCTCTCTCTCTCGCTCTGTCTATCTCTCCTTGCTTCACAAGATGAAACCCCTCTCCCCCCCAAACTATCATCGTTCTTTCTTCCTCTCATTCTCGTTAACTCTTCTCTCCCTCCAGCCTCCTCCCTCATCCTCTGCTTCTTCTTCTTCAGCTTTCATAGACCAAACTCACCAGCTTTTCACCTTCAAGAATTCCCTCCCTGACCCCTCCGTACTCCATAACTGGCTCCCTAATCACAATCCCTGTTCATTCATGTCGGTTTCTTGCCGGGATACCCTCGTTTCTTCCATAGACCTCAGCTTTATCCCCTTGAACACTAATTTCAGCCTTGTCTCAACCTATCTTCTCACCCTCGACCACCTTCAAGTTCTTAATCTGCAAGGCACCAATCTTTCCGGCACCATTTCTTTCTCGGCTGGCTCCAGGTGTAGCAGCTCATTGAGCTCCTTAGATCTGTCTCAGAACACTTTGTCTGGTTCCGTTTCGTCCTTGAACTATTTGTCCTCTTGTTCGGCCCTGAAGTCTCTCAATCTTTCAGGTAACCTCATAGAATTTTCAGGGAGAGATTCAGCCGGGTTGAGGCTCAGTCTCCAGGTCCTCGATCTCTCTTACAACAATAAGATTTCGGGTCCCAACGTTCTCCCATGGATCTTATCACAGGGCTGCGACGGCTTGAAGCTCTTGTCTCTAAAGGGCAACAGAATCACAGGGGAAATGAACTTCTCCACTTGCAAAGCTTTGCAGCATCTGGACCTTTCCTCTAACAACTTCTCTCTCGCTGTTCCTTCTTTTGGTGAGTGTCTTGCTTTAGAGTACCTCGACATCTCTGCTAATAAGTTTTACGGTGACATTGGTCGCGCCATCTCCAGTTGCAAGCAGCTCAGCTACTTGAACATCTCGTCCAACGAGTTCTCCGGTCCGGTTCCCTCACTTCCATCCGGTTCTCTACAGTTCTTATATCTTGCCAACAACCATTTCCAGGGACAGATTCCTGCTAGCCTTTCTGACTTGTGCCCTACCCTGGTAGTACTCGATCTTTCCTCAAACAACCTTTCCGGTGTGCTTCCAAGCGATTTCAGGGCTTGTTCTTCATTGGAATCTTTTGATATATCCCACAACAAGTTCACCGGCGAGCTTCCGGTTGATTTTTTCGCAGAATTGATTGGCTTGAAGAGGCTAGTTCTTTCCTTTAACGATTTCACCGGTACACTTCCTCATACCCTCTCTCAGTTCTCGAAGTTGGAGTCGTTGGATCTGAGCTCTAATAACCTCACTGGCTCAATTCCTGGAGGGCTGTGTGAAGATCCGAGGAATAATTTGAAAGAATTATACCTGCCGAATAATCTGTTGACGGGTTCTATTCCACCCACACTCAGCAACTGTTCTCAGCTTGTGACTTTGGATTTGAGTTTCAACTACTTGACGGGGACTATCCCTTCCAGCTTTGGGTCCCTTTCAAAACTCAAAGATTTGATTCTTTGGCTGAACCAGCTCCATGGAGAAATACCCCAAGAGCTTGAGCACATTAAGACTCTAGAGAATTTGATTCTGGACTTCAATGAGTTGTCTGGGACCATCCCTTCTGGCTTAAGCAACTGCACCAGCATGAATTGGTTGTCCTTGTCTAATAACAGGTTGAGTGGGGAGATTCCGGCATGGATTGGTCAGCTTTCAAATCTTGCGATCTTGAAATTGAGTAATAACTCCTTCTCTGGGAGGATTCCGCCGGAGCTTGGAGATTGTCAAAGATTGATATGGTTGGATCTGAATACTAATTATCTGAATGGATCAATTCCTACTGAGTTATTTAAGCAGTCGGGCAAAATTGAAGTTAATTTCATCAGTCGAAAGACATATGTGTACATCAAGACTGACGGTAGTAAGCAGTGCCATGGAGCAGGAAATTTACTAGAGTTTGCTGGTATTAAAATGGAGCAGATGAGTAGAATTTCATCCAGGAGCCCTTGCAATTTCACTAGCTTCACTAGAGTTTATAATGGTAAGGTCCGTCCCAAGTTTAATAGTGGTTCTATGATTTTTCTTGACATTTCACATAATATGTTGTCGGGTGCTCTTCCCAAGGAGATGGGGAGTATGAATACTTTGTTCATTTTGAACTTGGGATACAATGATATATCTGGGAGCATCCCACCGGAATTTGGAGACATGAAAAATCTCAACATTCTTGATCTCTCCAACAATAGGCTTGAAGGACAGATTCCTCAAACCTTGACAGGCATTTCCATGCTCACAGAAATTGATTTGTCAAACAACAATCTCTCAGGATTGATTCCTGAATCTGGTCAATTTGATACCTTTCCAGCTGCCAAATTTGCAAATAATTCTGGTCTCTGTGGTGTCCCTCTTGTTGCATGTGGATCAGACTCGAGATCAGGTGCAAATGCCCGGCATCAGATGTCTAACCAGAGACGGGCATCTCTGGCAAGGAGTGTGTCCATTGGTTTGCTGTTCGCCCTTTTTTGCATCCTTGGTATCATCATTATCGCCTTTGAGGCAAGAAAGAGGAGGAAGAAGAAGGAGGCTACTTTGGATGTCTACATCGACAGCCGGTCTCACTCAGGTACAGCTAATGCCGGTTGGAAGGTGAGTGCTCGGGAAGCTCTTAGCATAAATCTTGCAACTTTTGAGAAGCCCCTTCGGAAGCTTACTTTTGGGGATCTTCTTGAAGCCACAAATGGTTTCCACAATGACAGTCTTATTGGTAAAGGTGGTTTTGGAGATGTATACAAGGCTCAGCTGAAAGATGGAAGTGTAGTGGCGATTAAGAAACTGATTCATATCAGCGGACAAGGGGACAGGGAGTTCACTGCTGAAATGGAAACAATTGGGAAAATTAAGCATCGGAACCTTGTTCCCCTTCTTGGGTACTGCAAAGTTGGAGAAGAAAGACTCTTGGTTTATGAATACATGAAATATGGAAGCCTGGAGGATGTTTTGCATGATCCAAAGAAATCCGGGATGAAGCTGAACTGGGCAGCCAGGAGGAAGATTGCAATTGGAGCTGCTAGGGGATTGGCTTTTCTTCACCACAATTGCATTCCTCATATCATTCACAGAGACATGAAATCAAGCAATGTGTTGCTTGACGGGAATCTGGAAGCCAGAGTCTCCGATTTTGGAATGGCTAGGCTTATGAGTGCCATGGATACCCATTTAAGTGTCAGCACACTAGCAGGAACCCCTGGTTATGTTCCTCCCGAATACTACCAGAGCTTTAGATGCTCCACGAAAGGTGATGTTTATAGTTACGGTGTAGTTTTATTGGAGCTCCTGACAGGGAAACGGCCCACAGATTCATCAGACTTTGGTGATAACAATCTCGTGGGATGGGTTAAACAGCATGCTAAATTAAAAATAAGTGATGTTTTTGACCCAGAGCTCATGAAAGAGGATCCGAGTCTTGAGATTGAGCTTTTACAACACTTAAGAGTTGCTTGTGCTTGTCTTGATGATCGACCTCTGAGGCGTCCCACAATGATTCAAGTGATGGCAATGTTTAAGGAAATCCAAGCAGGATCTGGGATGGATTCCCAGTCTACCATCACGAGTGAGGATGGTGGTTTCGGCGCCATGGAAATGGTAGACATGAGCATAAAAGAAATCCCAGAATTAAGCAGCAAACAGTAG 3903 0.4497 MLHYCNSVVESELSNLAISFQWEDKYTLVTLFTRTFDSPGPPSSSSSLSLSNLHHSNRFLLIQCLPELLLSPSNGRPHTVRKKKPPSLSRSVYLSLLHKMKPLSPPNYHRSFFLSFSLTLLSLQPPPSSSASSSSAFIDQTHQLFTFKNSLPDPSVLHNWLPNHNPCSFMSVSCRDTLVSSIDLSFIPLNTNFSLVSTYLLTLDHLQVLNLQGTNLSGTISFSAGSRCSSSLSSLDLSQNTLSGSVSSLNYLSSCSALKSLNLSGNLIEFSGRDSAGLRLSLQVLDLSYNNKISGPNVLPWILSQGCDGLKLLSLKGNRITGEMNFSTCKALQHLDLSSNNFSLAVPSFGECLALEYLDISANKFYGDIGRAISSCKQLSYLNISSNEFSGPVPSLPSGSLQFLYLANNHFQGQIPASLSDLCPTLVVLDLSSNNLSGVLPSDFRACSSLESFDISHNKFTGELPVDFFAELIGLKRLVLSFNDFTGTLPHTLSQFSKLESLDLSSNNLTGSIPGGLCEDPRNNLKELYLPNNLLTGSIPPTLSNCSQLVTLDLSFNYLTGTIPSSFGSLSKLKDLILWLNQLHGEIPQELEHIKTLENLILDFNELSGTIPSGLSNCTSMNWLSLSNNRLSGEIPAWIGQLSNLAILKLSNNSFSGRIPPELGDCQRLIWLDLNTNYLNGSIPTELFKQSGKIEVNFISRKTYVYIKTDGSKQCHGAGNLLEFAGIKMEQMSRISSRSPCNFTSFTRVYNGKVRPKFNSGSMIFLDISHNMLSGALPKEMGSMNTLFILNLGYNDISGSIPPEFGDMKNLNILDLSNNRLEGQIPQTLTGISMLTEIDLSNNNLSGLIPESGQFDTFPAAKFANNSGLCGVPLVACGSDSRSGANARHQMSNQRRASLARSVSIGLLFALFCILGIIIIAFEARKRRKKKEATLDVYIDSRSHSGTANAGWKVSAREALSINLATFEKPLRKLTFGDLLEATNGFHNDSLIGKGGFGDVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDPKKSGMKLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDGNLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSSDFGDNNLVGWVKQHAKLKISDVFDPELMKEDPSLEIELLQHLRVACACLDDRPLRRPTMIQVMAMFKEIQAGSGMDSQSTITSEDGGFGAMEMVDMSIKEIPELSSKQ 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1908 1300 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 522 611 - -
Alju13g1908 1300 SUPERFAMILY Protein kinase-like (PK-like) 972 1263 IPR011009 -
Alju13g1908 1300 SUPERFAMILY L domain-like 156 465 - -
Alju13g1908 1300 ProSiteProfiles Protein kinase domain profile. 986 1261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1908 1300 ProSiteProfiles Leucine-rich repeat profile. 498 520 IPR001611 GO:0005515
Alju13g1908 1300 FunFam Brassinosteroid LRR receptor kinase 1062 1263 - -
Alju13g1908 1300 Pfam Protein kinase domain 986 1256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1908 1300 SMART serkin_6 986 1258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1908 1300 Pfam Brassinosteroid receptor island domain 692 759 IPR045381 -
Alju13g1908 1300 Pfam Leucine rich repeat 548 607 IPR001611 GO:0005515
Alju13g1908 1300 Pfam Leucine rich repeat 400 460 IPR001611 GO:0005515
Alju13g1908 1300 Pfam Leucine rich repeat 805 845 IPR001611 GO:0005515
Alju13g1908 1300 PANTHER RECEPTOR-LIKE PROTEIN 55 573 1262 - -
Alju13g1908 1300 Gene3D Phosphorylase Kinase; domain 1 947 1061 - -
Alju13g1908 1300 Gene3D - 697 760 - -
Alju13g1908 1300 PRINTS Leucine-rich repeat signature 499 512 - -
Alju13g1908 1300 PRINTS Leucine-rich repeat signature 808 821 - -
Alju13g1908 1300 Pfam Leucine rich repeat N-terminal domain 139 174 IPR013210 -
Alju13g1908 1300 FunFam Leucine-rich repeat receptor protein kinase EMS1 612 702 - -
Alju13g1908 1300 Pfam Leucine Rich Repeat 524 546 IPR001611 GO:0005515
Alju13g1908 1300 Pfam Leucine Rich Repeat 498 517 IPR001611 GO:0005515
Alju13g1908 1300 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 300 521 - -
Alju13g1908 1300 Gene3D Transferase(Phosphotransferase) domain 1 1062 1263 - -
Alju13g1908 1300 CDD STKc_IRAK 992 1261 - -
Alju13g1908 1300 SUPERFAMILY RNI-like 371 689 - -
Alju13g1908 1300 FunFam serine/threonine-protein kinase BRI1-like 2 948 1061 - -
Alju13g1908 1300 ProSitePatterns Protein kinases ATP-binding region signature. 992 1015 IPR017441 GO:0005524
Alju13g1908 1300 ProSiteProfiles Leucine-rich repeat profile. 231 253 IPR001611 GO:0005515
Alju13g1908 1300 SUPERFAMILY L domain-like 760 877 - -
Alju13g1908 1300 SMART LRR_typ_2 472 495 IPR003591 -
Alju13g1908 1300 SMART LRR_typ_2 832 855 IPR003591 -
Alju13g1908 1300 SMART LRR_typ_2 496 520 IPR003591 -
Alju13g1908 1300 SMART LRR_typ_2 423 446 IPR003591 -
Alju13g1908 1300 SMART LRR_typ_2 808 831 IPR003591 -
Alju13g1908 1300 SMART LRR_typ_2 642 666 IPR003591 -
Alju13g1908 1300 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 759 877 - -
Alju13g1908 1300 Gene3D Ribonuclease Inhibitor 144 877 IPR032675 -
Alju13g1908 1300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1108 1120 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1908 Alju-ChrAlju13 36604185 36610731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1908 111 1295 Receptor kinase-like Gene Family AT4G39400 68.117 0.0 1557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Alju13g1908 Pkinase 4.6e-45 CL0016