Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1905 ATGGGTTGCGTCAACACCAAGCTTTCTCCCTCTCGCGACGAGAAGTGGAAACACGACTATGGCTATGGTAGTCAAAGCAGATCAGCCATACACACGAGTCGCAGCTATAATAATCAGAGGCCACTCTCCGATAACAAGCTCCAGCATAGGATTTCAACTTCAAGAACAGCAGGGAATGGTGGTGGCGGTGGCGGCCGTGTCAGAGAAGAAGAGAGAGGAGAAAGGGTGGTTGGTGGAGCAGATCAGAAGCACGAGGTTGGCAATGTTTCAAAGAGATTTGTGGACGAGAAGATTGGAAAAGATGTGTGTGTCGATGCTTGGCCTAAGTGGTTGCTTGATAATATACCTGCACATGTTCTGGCTGTCCTTGTTCCTAAGAGTGCTGATTGTTATGAAATGCTTGCCAAGGTAGGACGTGGAACATATAGCAACGTGTACAAGGCCAGAGAAAAGGCAACGGGGAAGATTTTCGCCATGAAGAAGGTCCGGTTTGACACATCAGATTCTGAAAGTATAAAGTTCATGGCGAGAGAAATCATGATTCTGCAGAAGCTAGACCATCCCAACGTCATCAAGCTTGAAGGCATAGCCACCTCAAGAATGCAGTATAGTCTCTACCTAGTCTTCGATTACATGCGGTCCGACCTTACCAGAGTCATCACCCGCCCCGGCGAGAAACTCACTGAACCACAGATTAAGTGTTATATGCAGCAATTGCTTTCTGGACTACAGCATTGCCATGAGAGGGGAGTGATGCACCGAGACATAAAAGCTTCAAACTTGTTAATAGACAAGAAAGGAGTGCTAAAAGTTGCAGATTTTGGGCTGGCAAATTCCTTTGATCTTAAACCAAAAGGTCCTTTCACCAATCGAGTGGTGACACTCTGGTATAGAGCTCCTGAATTACTTTTGGGTTCAACTGATTATGGTTTCAACATTGATCTCTGGAGTGCTGGATGCCTCTTGGCTGAGATGTTCTTCGGAAAGCCCATCATGCCTGGCAGGACTGAGGTTGAACAATTGCACATGATCTTCAAGCTATGTGGTTCTCCAACAGAGGATTACTGGAAGAAATTGAAGCTAATGACAAGTTATAGGCCACCAAATTACAAGCCTAGTTATGAGGAAGCCTTCAGGGATTTTCCTCCCTCTTGTATTGGCCTCTTAACTACGCTTCTCGATCTTGATCCTAACTATCGTGGCACTGCTGCCTCTGCCCTCCAATCTGAATTCTTCAAGACTAGTCCTTTCACATGCTCTCTTTCAGCTTTACCAGTAATATACAAAGACGAGGATGAGCGCTCACATACTAAAAGACGCAAAAAGCATAGGTCATACAAGAAAGGACAAATACCTCAGCCAAGTAACCTAACTCAGTCAGGAAAGAATAAAGTTGCCGACGGACAAGTCGTGAGAAATCCAGAATGGTCAAAGGAGGTGACACCTTTGGTTTTTCTAATTTTAAAAGGATATGAGAAGAATGTGGAAGGAAGCATGTCTGGTTTAGAAACGGGGTATAGTGTAAGCAGCACATCGTCGAACTCAAAACAATATACAACAGAAGGAAGCTTGTATACATCACTGACTCTGTCTCCAGTTTTTCTGTCAAGTGGTGAGAAACGATCTCCCAGGACTGAAGCACATCCTAATGCTCTCAAGAACGTCAAGAACTATAGCATCAGCTACTTGCAGGCCATGATGAGTGGCACAGAAGGCAATGACTACTCAGCTCAATTTCGCCGATCCTTTTCTGCTGTGGAATCTCGGTTTGATCCTGATAAGTTATCTAATCTCATTGAATTAAATAAGAGGTTGGGCAATCGAAATTGA 1830 0.4459 MGCVNTKLSPSRDEKWKHDYGYGSQSRSAIHTSRSYNNQRPLSDNKLQHRISTSRTAGNGGGGGGRVREEERGERVVGGADQKHEVGNVSKRFVDEKIGKDVCVDAWPKWLLDNIPAHVLAVLVPKSADCYEMLAKVGRGTYSNVYKAREKATGKIFAMKKVRFDTSDSESIKFMAREIMILQKLDHPNVIKLEGIATSRMQYSLYLVFDYMRSDLTRVITRPGEKLTEPQIKCYMQQLLSGLQHCHERGVMHRDIKASNLLIDKKGVLKVADFGLANSFDLKPKGPFTNRVVTLWYRAPELLLGSTDYGFNIDLWSAGCLLAEMFFGKPIMPGRTEVEQLHMIFKLCGSPTEDYWKKLKLMTSYRPPNYKPSYEEAFRDFPPSCIGLLTTLLDLDPNYRGTAASALQSEFFKTSPFTCSLSALPVIYKDEDERSHTKRRKKHRSYKKGQIPQPSNLTQSGKNKVADGQVVRNPEWSKEVTPLVFLILKGYEKNVEGSMSGLETGYSVSSTSSNSKQYTTEGSLYTSLTLSPVFLSSGEKRSPRTEAHPNALKNVKNYSISYLQAMMSGTEGNDYSAQFRRSFSAVESRFDPDKLSNLIELNKRLGNRN 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1905 609 PANTHER CELL DIVISION PROTEIN KINASE 129 417 - -
Alju13g1905 609 MobiDBLite consensus disorder prediction 449 466 - -
Alju13g1905 609 MobiDBLite consensus disorder prediction 65 82 - -
Alju13g1905 609 Gene3D Transferase(Phosphotransferase) domain 1 214 451 - -
Alju13g1905 609 SUPERFAMILY Protein kinase-like (PK-like) 124 416 IPR011009 -
Alju13g1905 609 SMART serkin_6 131 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1905 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Alju13g1905 609 MobiDBLite consensus disorder prediction 432 470 - -
Alju13g1905 609 Gene3D Phosphorylase Kinase; domain 1 121 213 - -
Alju13g1905 609 MobiDBLite consensus disorder prediction 25 59 - -
Alju13g1905 609 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Alju13g1905 609 MobiDBLite consensus disorder prediction 1 82 - -
Alju13g1905 609 FunFam probable serine/threonine-protein kinase At1g54610 118 213 - -
Alju13g1905 609 FunFam Putative serine/threonine-protein kinase 214 450 - -
Alju13g1905 609 Pfam Protein kinase domain 131 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g1905 609 ProSiteProfiles Protein kinase domain profile. 131 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1905 Alju-ChrAlju13 36570311 36573161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1905 126 444 Core Cell Cycle Gene Families AT5G10270 47.353 7.91e-98 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Alju13g1905 Pkinase 7.6e-71 CL0016