Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1891 ATGGCGAGATCACCTGAATGTGAGCATCCACAGAAGGCTTTTGGCTGGGCTGCCAGGGATACTTCTGGCCATATTTCTCCTTTTCCCTTCTCGAGAAGGGAAGTTGGGGCCGACGACGTTGCTTTGAAAATTCTGTTTTGTGGGGTTTGCCATTCGGATCTGCATACTGTTAAGAACGATTGGGGTTTCACAACTTACCCTGTTGTTCCCGGACATGAAATTGCTGGCGTCGTTACACAAATTGGGAATAATGTGAAAACATTCAAGGTGGGTGACAGAGTTGGAGTTGGTGTCATGGTGGATTCCTGCAAAACATGTGATGCTTGCCAGCAGGACCTGGAGAATTACTGTCCTAAAAAAGTATTTACCTATAACAGCCCTGGCTATGACGGGACAAGAACCTATGGAGGATATTCTGATTTTGTGGTTGTTCACAAGCAGTTTGTGCTCAGATTTCCTGAGAACTTACCCCTTGATGCTGGTGCTCCACTTCTCTGTGCTGGGATTACTGTGTACAGTCCAATGAAGTATTATGGAATGACAGAGCCAGGTAAACATTTGGGAGTGGCAGGGCTTGGTGGGCTAGGTCATGTTGCAGTGAAAATTGCTAAGGCCTTTGGGCTGAAAGTTACTGTCATTAGCACCTCTCAGAAAAAGGAAGTTGAGGCTATCAACAGACTTGGGGCCGATTCCTTTCTTGTTTCTACCGACTCTGAAAAAATTAAGGAAGCTATGAAAAGCATGGACTTCATCATAGACACAATTTCTGGAGTTCATTCCCTCGTTCCTCTGCTCGGTCTTCTGAAATTAAACGGGAAGCTGATCACCGTGGGGTTGCCTGAGAAACCCTTAGAGCTACCTATCTTTCCTCTAGTTGCAGAACGGAAGCTTGTGGGAGGAAGTGACTTCGGAGGAATAAAAGAGACGCAGGAGATGCTGGAGTTTTGTGGGAAGCACAACATCAGTGCAGATATAGAGATGATTGTGTTGGACGAAATCAACACTGCCATGGAAAGGCTGGCCAAGTCTGATGTCAAGTATCGCTTTGTGATCGACGTGGCCAACTCCTTAAGAGGGTAA 1080 0.462 MARSPECEHPQKAFGWAARDTSGHISPFPFSRREVGADDVALKILFCGVCHSDLHTVKNDWGFTTYPVVPGHEIAGVVTQIGNNVKTFKVGDRVGVGVMVDSCKTCDACQQDLENYCPKKVFTYNSPGYDGTRTYGGYSDFVVVHKQFVLRFPENLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIAKAFGLKVTVISTSQKKEVEAINRLGADSFLVSTDSEKIKEAMKSMDFIIDTISGVHSLVPLLGLLKLNGKLITVGLPEKPLELPIFPLVAERKLVGGSDFGGIKETQEMLEFCGKHNISADIEMIVLDEINTAMERLAKSDVKYRFVIDVANSLRG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1891 359 SMART PKS_ER_names_mod 17 351 IPR020843 GO:0016491
Alju13g1891 359 CDD CAD1 14 352 IPR047109 GO:0016616
Alju13g1891 359 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Alju13g1891 359 FunFam probable cinnamyl alcohol dehydrogenase 16 175 - -
Alju13g1891 359 Gene3D - 16 353 - -
Alju13g1891 359 Gene3D - 167 323 - -
Alju13g1891 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Alju13g1891 359 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Alju13g1891 359 SUPERFAMILY GroES-like 22 185 IPR011032 -
Alju13g1891 359 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0016616
Alju13g1891 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Alju13g1891 359 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1891 Alju-ChrAlju13 36474038 36481714 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1891 11 357 Monolignol Biosynthesis Gene Families AT2G21730 71.060 0.0 504