Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1883 ATGCTGGAAAACTCGAACTCATCGGAAAATAACCCAGCTCCGGTCCAGGACCGCCCCGTGGAGGACGGAGGTGGCAGTGGGCCTTACTCCGATGGCCTCCAAGAGCAACGGGGGCTCGCCGACCTGGAAGTTGACCGGAATTCTGCCCGTCACCGCTGGCCCCGAGAAGAGACATTGGCTTTGCTCAAAATAAGGTCTGAAATGGACATTGCTTTTAGGGATATCAGCCCCAAAGGTCCTCTCTGGCAACAGGTTTCGAGGAGATTGGCTGAGCTAGGATACAATAGGAGTGCAAAAAAATGTAAGGAGAAGTTCGAAAACATTTACAAGTACCATAGAAGGACCAAGGCAGGCCGTTATGGCCAACCTAACGGAAAGACTTATCGTTTCTTTGAGCAACTAGAAGCTCTTGACGCCAACCTCCTCCTTCTACCACCTCCAACTTCAGCCGAAAAGGATCACGCGCCAACCTCACTTGATGTTGTTCATCATGCCATACCCTGCTCTGCTCGATTCCCTAGTATTGCAAATAGTGATTCTATTACTTCTTCTTCCAATGAAGAATCACCCAAAAAGAAGAGTAAGCTGACTAAGTTTTTCCAGGGCTTGATGAAGCAAGTAATAGAGAAGCAAGAGGCTCTACAGAAGAATTTTATGGAGTTGTTGGAAAAATGTGAGCAAGATCGAATAGCGAGGGAGGAAGCATGGAGGACTCAAGAATTAGCTCGGCTTAACAAGGAGCGTGAGCTTTTGGCTCAAGAAAGATCTGCCGCTGCAGCTAAAGATACTGCGTTGATTGCCTTTCTGAAGAAGATAACAGAACAACCACCATGCCCAGTGCAGCTGCCGGAGAATATTCCGGTTGACCGGAACATGATTCCAGATGATATAGATAAGAACAATCAAGAAAAAGTCAATGGAGGTTGTACCGTTAGCGTTACGGATAAGCAAGAATGTGGAAATAATGGGAATTTTATACAGATGAGTTCATCCCGTTGGCCTAAAGAAGAAGTGGAAGCTCTGATTAGATTGAGGACAAATATGGATGCAGAATATGAAGGAGGAAATAATGGGACTAAGGGACCTCTGTGGGAAGAAATGTCATCGGCAATGAAAAAGATTGGGTACGATCGCAGTGCAAAGAGATGCAAAGAGAAATGGGAGAACATAAACAAGTACTTTAAGAGGATGAAGCAGAAAAACAAGAGAAAGCCTGAGGATTCAAAGACATGCCCATATTTTCACCAGCTAGATGAACTATACAGTAAGAAACCCAGGAAGGTACAAGAATCAGATGCTTCTGGGAATGAGTTGAAGGCGGAGGAGCTATTAATGCATATAATGAGCGGTCAAGAAGAGCGACAATCATCTGAAGACACCGGCAGAGAGAAGACGAACCTGATTGAAGGAGATAAGGAAGATGCGGATCAGACGGTAGACAACAGTAATTCAACAGCAATCATGGGTTGA 1470 0.4537 MLENSNSSENNPAPVQDRPVEDGGGSGPYSDGLQEQRGLADLEVDRNSARHRWPREETLALLKIRSEMDIAFRDISPKGPLWQQVSRRLAELGYNRSAKKCKEKFENIYKYHRRTKAGRYGQPNGKTYRFFEQLEALDANLLLLPPPTSAEKDHAPTSLDVVHHAIPCSARFPSIANSDSITSSSNEESPKKKSKLTKFFQGLMKQVIEKQEALQKNFMELLEKCEQDRIAREEAWRTQELARLNKERELLAQERSAAAAKDTALIAFLKKITEQPPCPVQLPENIPVDRNMIPDDIDKNNQEKVNGGCTVSVTDKQECGNNGNFIQMSSSRWPKEEVEALIRLRTNMDAEYEGGNNGTKGPLWEEMSSAMKKIGYDRSAKRCKEKWENINKYFKRMKQKNKRKPEDSKTCPYFHQLDELYSKKPRKVQESDASGNELKAEELLMHIMSGQEERQSSEDTGREKTNLIEGDKEDADQTVDNSNSTAIMG 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1883 489 Coils Coil 204 228 - -
Alju13g1883 489 FunFam Trihelix transcription factor GT-2 333 396 - -
Alju13g1883 489 FunFam Trihelix transcription factor GT-2 53 114 - -
Alju13g1883 489 Gene3D - 53 114 - -
Alju13g1883 489 Gene3D - 333 396 - -
Alju13g1883 489 MobiDBLite consensus disorder prediction 448 489 - -
Alju13g1883 489 CDD GT1 52 116 - -
Alju13g1883 489 CDD GT1 331 398 - -
Alju13g1883 489 SMART sant 329 393 IPR001005 -
Alju13g1883 489 SMART sant 49 111 IPR001005 -
Alju13g1883 489 MobiDBLite consensus disorder prediction 1 45 - -
Alju13g1883 489 PANTHER FI21293P1 23 473 - -
Alju13g1883 489 ProSiteProfiles Myb-like domain profile. 331 391 IPR001005 -
Alju13g1883 489 Pfam Myb/SANT-like DNA-binding domain 50 137 IPR044822 -
Alju13g1883 489 Pfam Myb/SANT-like DNA-binding domain 331 420 IPR044822 -
Alju13g1883 489 Coils Coil 241 261 - -
Alju13g1883 489 ProSiteProfiles Myb-like domain profile. 45 109 IPR001005 -
Alju13g1883 489 MobiDBLite consensus disorder prediction 448 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1883 Alju-ChrAlju13 36426748 36428528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1883 45 424 Trihelix Transcription Factor Family AT1G76880 44.519 9.39e-119 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju13g1883 Myb_DNA-bind_4 1e-20 CL0123