Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1875 ATGAGTGAGATGGACTATGAGCTAGTTGATCACTCCTTCTGCCAGCAACTCCATGAATATAGCTTAGAAAATGCATTTCCATTCCAAACAGAATATAATCTCTTATCTCCAAATAACTCACAAGATGCAATGCTCGACCAAGAGTTCATTGAAGGATTACTGCAGCAGCCATGTACAGAGCTTCTGGACTTTGATTTCATGGATCCTAATGTCTCAGTGGGGATAGAAACAGAATTGAGCCAAGAAGTTACCACTTCGAGGTGCCAGGAAAATGGAGATCCATGTTTAATGCGTATTCAAGCGGCTCTAATGGAAGAAAGCAGTTTAGCTGATCTCTTGCTGACAGGAGCTGAAGCTGTTGAAGCACAGAATTGGGCTCTAGCCTCAGACATCATTAAAAAGATTAACCATGACTTGTGTGTAGAAAATAATGGAGATAGTTTGTTGAACAGGCTGGCTTTTTTCTTTACTCAAGGTCTGCATTATAAAACCATAAATGCCCCTGCAGTGAACTATGAACCTGTTTCTTCCCGGACAGACACTTTCTTCACCTTTCAGATCCTCCAGGAACTATCTCCTTATGTGAAATTTGCTCATTTCACTGCCAACCAAGCGATATTTGAAGCCACTGAAGGTGATCGAGAGATCCATGTCATTGATTTTGACATCTTGGATGGGATCCAGTGGCCGCCTTTGATGGTTGACCTGGCAATGAGGAAGAACACTAACCTTAGAGTAACAGCGATCACATTGGACCATCAAAGTGTCGCCAGCGTCCAACAAACTGGAAGAAGATTACAAGAGTTTGCTGACTCTATCAATTTCTCATTCACGTTCGATCAAATGATGATTACTGGGGAAGAAGATTTTAGAAGAATCACATTGGGTCCTGCACTTATAGTCAATTGTATGATACACCAGTGGATGCCCATCAGGAGTTTCTCACTGATCAAAACTTTCCTGGATGGTGTAAGCAAATCATCACCTAAGCTCGTTATTTTAGTAGAAGATGAACTATTCAATTTTTCAAGGCTCAAATCTATGTCCTTTGTGGAGTTCTTCCATGAGGCTTTGCACCATTACACAGCAATTTCTGATTCACTTGCTAGTAGTTTCTGGGATGACTACAAGATGAAGTGGATAGAAAAAGAAGTTCTGGGAATTAGGATTATAGACAGTGTGAGACAGTTTCCTTGTGAAGGGGAGGAGAGAACTTTGTGGGAAGAAGGATTGAACTCCCTGAAAGGGTTTAAACGAGTTCCTGTGAGTAACTGCAATGTTTCTCAAGCCAAGTTCTTGGTGAGCCTCTTTGGTGGGGGGTATTGGGTGCAACATGTCAAGGGCAGATTGTCTGTGTGTTGGAAGTCTAGGCCTTTAACAGCGGCTTCAATTTGGGTTCCCACAAGAAGTTAA 1413 0.4197 MSEMDYELVDHSFCQQLHEYSLENAFPFQTEYNLLSPNNSQDAMLDQEFIEGLLQQPCTELLDFDFMDPNVSVGIETELSQEVTTSRCQENGDPCLMRIQAALMEESSLADLLLTGAEAVEAQNWALASDIIKKINHDLCVENNGDSLLNRLAFFFTQGLHYKTINAPAVNYEPVSSRTDTFFTFQILQELSPYVKFAHFTANQAIFEATEGDREIHVIDFDILDGIQWPPLMVDLAMRKNTNLRVTAITLDHQSVASVQQTGRRLQEFADSINFSFTFDQMMITGEEDFRRITLGPALIVNCMIHQWMPIRSFSLIKTFLDGVSKSSPKLVILVEDELFNFSRLKSMSFVEFFHEALHHYTAISDSLASSFWDDYKMKWIEKEVLGIRIIDSVRQFPCEGEERTLWEEGLNSLKGFKRVPVSNCNVSQAKFLVSLFGGGYWVQHVKGRLSVCWKSRPLTAASIWVPTRS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1875 470 Pfam GRAS domain family 110 465 IPR005202 -
Alju13g1875 470 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 104 461 IPR005202 -
Alju13g1875 470 ProSiteProfiles GRAS family profile. 100 466 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1875 Alju-ChrAlju13 36375111 36376523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1875 109 469 GRAS Transcription Factor Family AT1G66350 31.300 1.20e-41 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju13g1875 GRAS 1.1e-72 CL0063