Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1864 ATGGCATACTCTTCTCTTTCTTTTATCTTCCTTCTCATCTCCCTCTCCTCCATTATCGCCGGTGCCTCCCCCTCTGTCCAACGCGCCTGTGATGCCACGCGCTTCCCCCTAGAATGCCTCAACGGCCTCCCTCCCAATTCCACCACCTCGCTTCAAATCATCCAATCCGCCATCGCCGTCTCCGCCGACAACCTTAAGACCGCTCAATCCAAGATCAAATCCATCCTCGACTCCTTGCCCGACGACGGTGACCATCTCAATCGCACCAGGGCCGCCGAGAGCTGTCTCGCCATCCTCCATGACTCCGAGTATCGCATTTCCCTCGTCAACGACGCCCTCCCGGACGGCAACAAGATCAAGGACGCACGCGCGTGGATGAGCGCTGCATTGGCCTACCAATTCGACTGCTGGTCCGGGTTGAAGTACGTATACGGAAACGACGCCGTCTCCATTAACGACACGCTGGTCTTCCTGGACACCCTCACGAGATACTCCAGCAACGCGTTGAGCATGATGCTGTCGTACGACGTGTTTGGCAGCAATACGACGTCGTGGAAGACGCCCAGGACGGAGCGCGATGGTTTCTGGGAGCCACCGTCGAGAAAAGCAATGGGGTTTGGGTACAAGGGCGGGTTTCCGTTGGATTTGAAGGTGGACGTTATGGTTTGTAAGGCAAAAGAGTGTGATTACCAGACGGTGCAGGAAGCCGTTAACGCCGCTCCGGATAACAGTGAAGGGAGGTTCGTGATATATATAAGAAAAGGGGTTTACAATGAAACGGTTAGGATTGCGATAGAGAAGAAGAACGTGATATTCTTAGGCGATGGAATGAGGAAGACCATTATCACTGGATCTGCACACGTAGGTCAGCCAGGGATGACCACCTACAATTCCGCTACCGTCGGAGTTCTTGGTGATGGATTCATGGCGAAGAATCTGACAATCCAAAACACAGCAGGACCCGATGCTCACCAAGCAGTGGCCTTCAGATCAGACAGCGACCTCTCTGTTCTTGAAAACGTAGAATTCACAGGGAATCAAGACACCCTATACGCTCATTCCCTCCGTCAATTCTACAAATCATGTCGTATCCAAGGCAACGTTGACATGATCTTCGGAAACGCCGCGGCGTTTTTCCAAGAGTGCGCCGTCGTACTGAGTGAAAGGCAGAGCAACCCAGAAACAGGCGAGACCAACGCCGTGACGGCACATGGAAGAACAGACCCAGCACAATCCACAGGCTTTGTATTTTATAAATGTGTGGTGACAGGGACCAAGGATTACATGGCACAGTACAGGAAGAAGCCAGAGGTGCACAGGAACTTCTTGGGGAGGCCATGGAAGGTGTATTCAAGAACTGTGTTCATTCATTCTGTGTTTGAAGCTCTCATCTCGCCAGAGGGTTGGATGGCCTGGGACGGTGATTTGGGTCTGAACACACTGTATTATGGGGAGAGTAATAATACTGGTCCTGGTTCTGATCGGAGTCGGAGGGTGGCCTGGAGTAGTGAAATTCCCCGACAACACGTGCCGGTGTATTCGGTGGACAACTTCATTCAGGGAAGTGATTGGATTCCATCCTATCGGCCAAGTCGTCGGTAG 1602 0.525 MAYSSLSFIFLLISLSSIIAGASPSVQRACDATRFPLECLNGLPPNSTTSLQIIQSAIAVSADNLKTAQSKIKSILDSLPDDGDHLNRTRAAESCLAILHDSEYRISLVNDALPDGNKIKDARAWMSAALAYQFDCWSGLKYVYGNDAVSINDTLVFLDTLTRYSSNALSMMLSYDVFGSNTTSWKTPRTERDGFWEPPSRKAMGFGYKGGFPLDLKVDVMVCKAKECDYQTVQEAVNAAPDNSEGRFVIYIRKGVYNETVRIAIEKKNVIFLGDGMRKTIITGSAHVGQPGMTTYNSATVGVLGDGFMAKNLTIQNTAGPDAHQAVAFRSDSDLSVLENVEFTGNQDTLYAHSLRQFYKSCRIQGNVDMIFGNAAAFFQECAVVLSERQSNPETGETNAVTAHGRTDPAQSTGFVFYKCVVTGTKDYMAQYRKKPEVHRNFLGRPWKVYSRTVFIHSVFEALISPEGWMAWDGDLGLNTLYYGESNNTGPGSDRSRRVAWSSEIPRQHVPVYSVDNFIQGSDWIPSYRPSRR 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1864 533 FunFam Pectinesterase 4 216 531 - -
Alju13g1864 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 174 IPR035513 -
Alju13g1864 533 SUPERFAMILY Pectin lyase-like 218 528 IPR011050 -
Alju13g1864 533 FunFam Probable pectinesterase/pectinesterase inhibitor 51 24 174 - -
Alju13g1864 533 Pfam Plant invertase/pectin methylesterase inhibitor 25 171 IPR006501 GO:0004857
Alju13g1864 533 SMART PMEI_2 21 171 IPR006501 GO:0004857
Alju13g1864 533 Pfam Pectinesterase 219 521 IPR000070 GO:0030599|GO:0042545
Alju13g1864 533 PANTHER PECTINESTERASE 13 526 - -
Alju13g1864 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 24 171 IPR035513 -
Alju13g1864 533 Gene3D - 214 530 IPR012334 -
Alju13g1864 533 CDD PMEI-like_3 29 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1864 Alju-ChrAlju13 36293570 36295904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1864 26 524 Carbohydrate Esterase AT5G09760 61.961 0.0 638